CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NEIMF (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 95/200 (47.50%), Postives = 137/200 (68.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ESL +KVD L++GGG+  TF  A+G ++G SL E D ++ +  +M K  +KG S+ LPTDVV+A  F ADA + V     + +  M LD+GP +    ++ L    T++WNGP+GVFEFD+FA GT+A+A+ +A+       +I GGGD++AA+ K G+ D++ +ISTGGGA LE LEGK LP V AL+
Sbjct:  192 GSKVSTKLTILESLADKVDQLIVGGGIANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFTADAEAVVKDIADVAEDDMILDIGPKSAAELADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQ---SKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_STRMK (Phosphoglycerate kinase OS=Stenotrophomonas maltophilia (strain K279a) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.791e-47
Identity = 95/200 (47.50%), Postives = 137/200 (68.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ +L+ KVD L++GGG+  TF  A G++VG SL E D LD A  ++  AK++G  + LP DVV A +F  DA ++V    A+ +  + LD+GP     +++ +D   T++WNGP+GVFEF+ F+ GTEA+A+ +A        +I GGGD++AAV+K  +A ++S+ISTGGGA LE LEGKTLP V ALD
Sbjct:  191 GSKVSTKLELLANLVGKVDQLIVGGGIANTFIAAAGYNVGKSLYEPDLLDTAKKIVADAKARGADIPLPVDVVTAKQFMPDAVAEVKAVDAVAEDDLILDIGPQTAAQYAQLIDKAGTVVWNGPVGVFEFEAFSKGTEALARAIA---SSRAFSIAGGGDTLAAVDKFDIAQQVSYISTGGGAFLEFLEGKTLPAVAALD 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_STRM5 (Phosphoglycerate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.791e-47
Identity = 95/200 (47.50%), Postives = 137/200 (68.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ SL+ KVD L++GGG+  TF  A G++VG SL E D LD A  ++  AK++G  + LP DVV A +F  DA ++V    A+ +  + LD+GP     +++ ++   T++WNGP+GVFEF+ F+ GTEA+A+ +A        +I GGGD++AAV+K  +A ++S+ISTGGGA LE LEGKTLP V ALD
Sbjct:  191 GSKVSTKLELLASLVGKVDQLIVGGGIANTFIAAAGYNVGKSLYEPDLLDTAKKIVADAKARGADIPLPVDVVTAKQFLPDAVAEVKAVDAVAEDDLILDIGPQTAAQYAQLIENAGTVVWNGPVGVFEFEAFSKGTEALARAIA---SSNAFSIAGGGDTLAAVDKFDIAAQVSYISTGGGAFLEFLEGKTLPAVAALD 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATN (Phosphoglycerate kinase OS=Francisella tularensis subsp. novicida (strain U112) GN=pgk PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.279e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVAADEMILDIGPESEKRIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLSIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_COXBU (Phosphoglycerate kinase OS=Coxiella burnetii GN=pgk PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.670e-46
Identity = 95/199 (47.74%), Postives = 136/199 (68.34%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTKI ++E+LL+KVD L++GGG+  TF KAQG+S+G SL E + LD A    EKA  K VSL LP DV++AD+ + DA + V    A+       DVGP+   ++++ +    TI+WNGP+GVFE + F+ GT A+A+ +A+ +     +I+GGGD++AA++K  L D+MS++ST GGA LE LEGK LP +  L
Sbjct:  186 GSKVSTKIHLLENLLDKVDQLIVGGGIANTFLKAQGYSIGKSLCENEWLDAAQQFWEKAAEKNVSLPLPVDVIVADELSEDAKATVKNIDAVTSNESIFDVGPNTSATYAKLMAQAGTIVWNGPIGVFEIEAFSQGTRALAQAVAKST---AYSIVGGGDTLAALDKFNLTDQMSYVSTAGGAFLEFLEGKILPAIKIL 381          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BORPE (Phosphoglycerate kinase OS=Bordetella pertussis GN=pgk PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.670e-46
Identity = 95/199 (47.74%), Postives = 136/199 (68.34%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ +++SL +KVD L++GGG+  TF  A G  +G SL E ++++ A +++E  K +G  + +PTDVV A  F ADA + V  A  + +  M LD+GP   +  ++ L T  TI+WNGP+GVFEFD+FA GTE +A+ +A+ +G    +I GGGD++AA+ K G+AD+  +ISTGGGA LE LEGK LP V  L
Sbjct:  197 GSKVSTKLSILQSLADKVDQLVVGGGIANTFMLAAGLPIGKSLAEPEQVEQARAVIEIMKRRGAEVPIPTDVVCAKSFGADAAATVKAAADVAEDDMILDIGPQTAQRLADILKTAGTIVWNGPVGVFEFDQFAHGTEVVARAIADSAG---FSIAGGGDTLAAIAKYGIADQTGYISTGGGAFLEFLEGKALPAVAVL 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEWM (Phosphoglycerate kinase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=pgk PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.181e-46
Identity = 99/200 (49.50%), Postives = 136/200 (68.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL + VD L++GGG+  TF  A GH VG SL E D +D A  L   A+S+G  + +PTDVV+A +F+  A + +   + +    M  D+GPD+ ++ +E L    TI+WNGP+GVFEFD+F  GT+ IA  +A+ S     +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSKIVDQLVVGGGIANTFIAAAGHEVGKSLYEADLIDEAKRLAANAQSRGGDIPVPTDVVVAGEFSPTAAATLKGVSQVSADEMIFDIGPDSSEALAEILKNAGTIVWNGPVGVFEFDQFGEGTKRIAAAIADSS---AFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEON (Phosphoglycerate kinase OS=Shewanella oneidensis GN=pgk PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.181e-46
Identity = 97/199 (48.74%), Postives = 138/199 (69.35%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A GH+VG SL E D +D A  L+  A+S+G  + +PTDVV+A +F+  A + +   + + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA  +A+       +I GGGD++AAV+K G+ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVSDVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAHAIAD---SKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NITEC (Phosphoglycerate kinase OS=Nitrosomonas eutropha (strain C91) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 96/200 (48.00%), Postives = 134/200 (67.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL EKVD L++GGG+  TF KA G++VG SL E++ + +A SLM+K   +  ++ +  DVV+  KFAAD  + +  A A+ D  M  D+GP + +     +    T++WNGP+GVFEFD+F  GT AIAK +AE       T+ GGGD++AA++K  + DK+S+IST GGA LE LEGK LP V  L+
Sbjct:  192 GSKVSTKLTVLESLTEKVDQLVVGGGIANTFLKAAGNNVGKSLCEDELVPIAKSLMDKMNQRNATIPIAIDVVVGKKFAADEPAVLKEANAVSDDDMIFDIGPKSTQELVNIIMKAGTVVWNGPVGVFEFDQFGEGTHAIAKAIAETD---AFTLAGGGDTIAAIQKYDIYDKVSYISTAGGAFLEFLEGKKLPAVEILE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATW (Phosphoglycerate kinase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_NEIMF5.740e-4747.50Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]
PGK_STRMK9.791e-4747.50Phosphoglycerate kinase OS=Stenotrophomonas maltop... [more]
PGK_STRM59.791e-4747.50Phosphoglycerate kinase OS=Stenotrophomonas maltop... [more]
PGK_FRATN1.279e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_COXBU1.670e-4647.74Phosphoglycerate kinase OS=Coxiella burnetii GN=pg... [more]
PGK_BORPE1.670e-4647.74Phosphoglycerate kinase OS=Bordetella pertussis GN... [more]
PGK_SHEWM2.181e-4649.50Phosphoglycerate kinase OS=Shewanella woodyi (stra... [more]
PGK_SHEON2.181e-4648.74Phosphoglycerate kinase OS=Shewanella oneidensis G... [more]
PGK_NITEC2.849e-4648.00Phosphoglycerate kinase OS=Nitrosomonas eutropha (... [more]
PGK_FRATW2.849e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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