CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATT (Phosphoglycerate kinase OS=Francisella tularensis subsp. tularensis GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATO (Phosphoglycerate kinase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATH (Phosphoglycerate kinase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATF (Phosphoglycerate kinase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSYVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRAT1 (Phosphoglycerate kinase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.849e-46
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NITEU (Phosphoglycerate kinase OS=Nitrosomonas europaea GN=pgk PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.721e-46
Identity = 94/200 (47.00%), Postives = 135/200 (67.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL EKVD L++GGG+  TF KA G+++G SL E++ + +A SLM+K   +  ++ +  DVV+  KFA D  + +  A A+ D  M  D+GP++ +   + +    T++WNGP+GVFEFD+F  GT AIAK +AE       T+ GGGD++AA++K  + DK+S+IST GGA LE LEGK LP V  L+
Sbjct:  192 GSKVSTKLTVLESLAEKVDQLVVGGGIANTFLKAAGNNIGKSLCEDELVPVAKSLMDKMNKRNATIPIAVDVVVGKKFAEDEAAVLKAANAVSDDDMIFDIGPESAQELVDIIMKAGTVVWNGPVGVFEFDQFGEGTRAIAKAIAETD---AFTLAGGGDTIAAIQKYDIYDKVSYISTAGGAFLEFLEGKKLPAVEILE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRATM (Phosphoglycerate kinase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=pgk PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.721e-46
Identity = 92/201 (45.77%), Postives = 142/201 (70.65%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSK+STK+ V+ +LL+KV+IL++GGG+  TF KA+G  VG+SL E+D +  AT ++ KAK+ GV++ +P DV +A +F+ +A + +   + +    M LD+GP++ K  +E L +  TI+WNGP+GVFEFD FA GT+A++  +A+       ++ GGGD++AA+EK G+ D++S+IST GGA LE LEGK LP +  L +
Sbjct:  191 GSKISTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGKKLPAIEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DROME (Phosphoglycerate kinase OS=Drosophila melanogaster GN=Pgk PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.721e-46
Identity = 100/204 (49.02%), Postives = 131/204 (64.22%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGH-SVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN-SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KV+ KI++IE+LL+KV+ +++GGGM FTF K   +  +G SL +E+   +   L+EKAK   V L LP D V  DKFA +A  S+      IPDG MGLDVGP   + F+  +   K I+WNGP GVFEF  FA GT++I   +   +  G  +IIGGGD+ +   K      +SH+STGGGASLELLEGKTLPGV AL  A
Sbjct:  212 GAKVADKIQLIENLLDKVNEMIIGGGMAFTFLKVLNNMKIGGSLFDEEGSKIVEKLVEKAKKNNVQLHLPVDFVCGDKFAENAAVSEATVEAGIPDGHMGLDVGPKTRELFAAPIARAKLIVWNGPPGVFEFPNFANGTKSIMDGVVAATKNGTVSIIGGGDTASCCAKWNTEALVSHVSTGGGASLELLEGKTLPGVAALTSA 415          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHESM (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-4) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.347e-46
Identity = 96/199 (48.24%), Postives = 137/199 (68.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A GH+VG SL E D +D A  L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVADSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOBA (Phosphoglycerate kinase OS=Rhodopirellula baltica GN=pgk PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.347e-46
Identity = 104/204 (50.98%), Postives = 133/204 (65.20%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFA--ADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVS KI VI +LL   D +L+GG M +TF  A G  VG SLVE+DK++LA  LM K   K   L LP D    D F   A  N KVV A  IPD   GLD+GP+  K ++E + + KTI+WNGPMGVFE      GT+A+A+ +A+  G  V +IIGGGDS AAV+++G AD +SH+STGGGASL +LEG+    V  LD+A
Sbjct:  200 GAKVSDKINVINNLLGICDAVLIGGAMAYTFSLASGGKVGKSLVEKDKVELAKELMAKGGDK---LQLPVDTHCGDDFGNIAGCNKKVVAAGEIPDDMEGLDIGPETAKKYAEVIKSAKTIVWNGPMGVFEKPPMDEGTKAVAQAIAD--GDAV-SIIGGGDSAAAVDQLGFADDVSHVSTGGGASLAMLEGQAFAAVDLLDEA 397          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_FRATT2.849e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRATO2.849e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRATH2.849e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRATF2.849e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRAT12.849e-4646.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_NITEU3.721e-4647.00Phosphoglycerate kinase OS=Nitrosomonas europaea G... [more]
PGK_FRATM3.721e-4645.77Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_DROME3.721e-4649.02Phosphoglycerate kinase OS=Drosophila melanogaster... [more]
PGK_SHESM6.347e-4648.24Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_RHOBA6.347e-4650.98Phosphoglycerate kinase OS=Rhodopirellula baltica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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