CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_COLP3 (Phosphoglycerate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.347e-46
Identity = 96/200 (48.00%), Postives = 137/200 (68.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V++SL   VD L++GGG+  TF  A GH+VG SL E D ++ AT L ++AK+    + +P+DVV+A +F+A A + + P   +    M  D+GP+  K+ +E +    TI+WNGP+GVFEFD+F  GT+ IA+ +A+ S     +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLDSLAGIVDQLVVGGGIANTFIAADGHNVGKSLYEADLVEEATRLTKQAKANNGDIPVPSDVVVATEFSASATATLKPVNEVTADEMIFDIGPETAKALTEIIANAGTIVWNGPVGVFEFDQFGEGTKVIAQAIADSS---AFSIAGGGDTLAAVDKYEIADKISYISTGGGAFLEFLEGKKLPAVEILE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BORPA (Phosphoglycerate kinase OS=Bordetella parapertussis GN=pgk PE=3 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 6.347e-46
Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ +++SL +KVD L++GGG+  TF  A G  +G SL E ++++ A +++E  K +G  + +PTDVV A  F ADA + V  A  + +  M LD+GP   +  ++ L    TI+WNGP+GVFEFD+FA GTE +A+ +A+ +G    +I GGGD++AA+ K G+AD+  +ISTGGGA LE LEGK LP V  L
Sbjct:  197 GSKVSTKLSILQSLADKVDQLVVGGGIANTFMLAAGLPIGKSLAEPEQVEQARAVIEIMKRRGAEVPIPTDVVCAKSFGADAAATVKAAADVAEDDMILDIGPQTAQRLADILKAAGTIVWNGPVGVFEFDQFAHGTEVVARAIADSAG---FSIAGGGDTLAAIAKYGIADQTGYISTGGGAFLEFLEGKALPAVAVL 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BORBR (Phosphoglycerate kinase OS=Bordetella bronchiseptica GN=pgk PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.347e-46
Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ +++SL +KVD L++GGG+  TF  A G  +G SL E ++++ A +++E  K +G  + +PTDVV A  F ADA + V  A  + +  M LD+GP   +  ++ L    TI+WNGP+GVFEFD+FA GTE +A+ +A+ +G    +I GGGD++AA+ K G+AD+  +ISTGGGA LE LEGK LP V  L
Sbjct:  197 GSKVSTKLSILQSLADKVDQLVVGGGIANTFMLAAGLPIGKSLAEPEQVEQARAVIEIMKRRGAEVPIPTDVVCAKSFGADAAATVKAAADVAEDDMILDIGPQTAQRLADILKAAGTIVWNGPVGVFEFDQFAHGTEVVARAIADSAG---FSIAGGGDTLAAIAKYGIADQTGYISTGGGAFLEFLEGKALPAVAVL 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHESR (Phosphoglycerate kinase OS=Shewanella sp. (strain MR-7) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.289e-46
Identity = 96/199 (48.24%), Postives = 137/199 (68.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A GH+VG SL E D +D A  L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHESA (Phosphoglycerate kinase OS=Shewanella sp. (strain ANA-3) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.289e-46
Identity = 96/199 (48.24%), Postives = 137/199 (68.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A GH+VG SL E D +D A  L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ +++  TI+WNGP+GVFEFD+F  GT+ IA+ +A+       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGHNVGKSLYEADLIDEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTAAATLKAVNEVGDSDMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAD---SKAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAML 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_FRAP2 (Phosphoglycerate kinase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.289e-46
Identity = 94/201 (46.77%), Postives = 139/201 (69.15%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +LL+KV+IL++GGG+  TF KA+G ++G+SL EED +  A  ++ KAK  GV++ +P DV +A + + +A + V     + D  M LD+GP + ++ +E L +  TI+WNGP+GVFEFD FA GT+A++  +AE       ++ GGGD++AA+EK  + DK+S+IST GGA LE LEGK LP V  L +
Sbjct:  191 GSKVSTKLSVLHNLLDKVEILIVGGGIANTFIKAEGFNIGNSLYEEDLVGEAKDILAKAKELGVNIPVPVDVRVAKELSENAVAVVKNVADVADDEMILDIGPKSERNIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAE---SDAFSVAGGGDTIAAIEKFDIKDKVSYISTAGGAFLEFLEGKKLPAVEILKE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DESAA (Phosphoglycerate kinase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=pgk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.289e-46
Identity = 94/200 (47.00%), Postives = 132/200 (66.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            G+KVS+K+  +  +L+ VD  ++GG M  TF K+  ++VG S VE+D L  A SLM++A  +G +  +P D V+AD+F+ DA SK+VP   IP  WM +D+GP     +SE L + KTIIWNGPMGVFE D F+ GT ++   +A        +IIGGGD+  A+ K G   ++++ISTGGGA L L+EGKTLP V AL+
Sbjct:  195 GAKVSSKLGALHHMLQHVDKFVVGGAMASTFLKSVDYNVGKSKVEDDLLWEARSLMKRATMQGTAFYIPVDAVVADRFSPDAESKIVPIREIPPEWMIMDIGPATALLYSEVLASAKTIIWNGPMGVFEMDAFSRGTMSMVNYVA---NSYALSIIGGGDTDVAIHKAGETHRITYISTGGGAFLALMEGKTLPAVAALE 391          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XYLFA (Phosphoglycerate kinase OS=Xylella fastidiosa GN=pgk PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.083e-45
Identity = 92/199 (46.23%), Postives = 135/199 (67.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L+  V+ L+ GGG+  TF  A G+S+G SL E D ++ A  ++  AK++G  + LPTDVV+A +F     + V    AI    + LD+GP   + ++  ++T  T++WNGP+GVFEFD F+ GTE +A+ +A  S     +I GGGD++AA++K G+AD++S+ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVNNVEQLITGGGIANTFLAAAGYSIGKSLYEGDLIETAREIITAAKARGAEIPLPTDVVVAKQFLPGVTATVKTVDAIVADDLILDIGPQTARHYAALIETAATVVWNGPVGVFEFDAFSKGTEVLARAVAASS---AFSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHESH (Phosphoglycerate kinase OS=Shewanella sediminis (strain HAW-EB3) GN=pgk PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.083e-45
Identity = 97/200 (48.50%), Postives = 136/200 (68.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL   VD L++GGG+  TF  A GH VG SL E + ++ A  L+  A+S+G  + +PTDVV+A +F+  A++ +   + +    M  D+GPD+ ++ SE L    TI+WNGP+GVFEFD+F  GT+ IA+ +AE       +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGHEVGKSLYEANLIEEAKRLVANAQSRGGDIPVPTDVVVAGEFSPTASATLKDVSEVTSDDMIFDIGPDSAEALSEILKNAGTIVWNGPVGVFEFDQFGEGTKRIAQAIAE---SDAFSIAGGGDTLAAVDKYDIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XANC5 (Phosphoglycerate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=pgk PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.414e-45
Identity = 94/199 (47.24%), Postives = 137/199 (68.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L+ KVD L++GGG+  TF  A GH+VG SL E D +  A  ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A ++++ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVNKVDQLIVGGGIANTFIAAAGHAVGKSLNEPDLIPTANQIVADAKARGAEIPLPTDVVVAKQFLPDAQASVKSLDAVDADDLILDIGPHTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAQEVTYISTGGGAFLEFLEGKTLPAVAAL 386          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_COLP36.347e-4648.00Phosphoglycerate kinase OS=Colwellia psychrerythra... [more]
PGK_BORPA6.347e-4647.24Phosphoglycerate kinase OS=Bordetella parapertussi... [more]
PGK_BORBR6.347e-4647.24Phosphoglycerate kinase OS=Bordetella bronchisepti... [more]
PGK_SHESR8.289e-4648.24Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_SHESA8.289e-4648.24Phosphoglycerate kinase OS=Shewanella sp. (strain ... [more]
PGK_FRAP28.289e-4646.77Phosphoglycerate kinase OS=Francisella philomiragi... [more]
PGK_DESAA8.289e-4647.00Phosphoglycerate kinase OS=Desulfatibacillum alken... [more]
PGK_XYLFA1.083e-4546.23Phosphoglycerate kinase OS=Xylella fastidiosa GN=p... [more]
PGK_SHESH1.083e-4548.50Phosphoglycerate kinase OS=Shewanella sediminis (s... [more]
PGK_XANC51.414e-4547.24Phosphoglycerate kinase OS=Xanthomonas campestris ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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