CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SHEFN (Phosphoglycerate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pgk PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.414e-45
Identity = 95/200 (47.50%), Postives = 136/200 (68.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL  KVD L++GGG+  TF  A G+ VG SL E D ++ A  L+  A+S+G  + +PTDVV+A +F+  A + +     + D  M  D+GPD+ ++ ++ ++   TI+WNGP+GVFEFD+F  GT+ IA+ +A        +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSTKVDQLVVGGGIANTFIAAAGYKVGKSLYEADLVEEAKRLVANARSRGGDIPVPTDVVVASEFSPTAAATLKSVADVTDSDMIFDIGPDSAEALAKIIEQAGTIVWNGPVGVFEFDQFGEGTKRIAQAIA---NSKAFSIAGGGDTLAAVDKYNIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MARMS (Phosphoglycerate kinase OS=Marinomonas sp. (strain MWYL1) GN=pgk PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.414e-45
Identity = 102/200 (51.00%), Postives = 135/200 (67.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL +KVD L++GGG+  TF  A G  VG SL EED +  A +LM K      S+ LP DVV+A  FA DA + V  A  +    M LD+GP A  +F+  L+ ++TIIWNGP+GVFEFD+F  GT+A+A  +A   G    +I GGGD++AAV+K  +AD++S+ISTGGGA LE +EGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSDKVDQLIVGGGIANTFLAAAGFPVGKSLYEEDLIPQAKALMAKT-----SIPLPEDVVVATAFAPDAVATVKDAADVGPDDMILDIGPKAAAAFAALLEESQTIIWNGPVGVFEFDQFGGGTKALAMAIANSKG---FSIAGGGDTLAAVDKYDIADQVSYISTGGGAFLEFVEGKVLPAVAMLE 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XANOP (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=pgk PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.412e-45
Identity = 94/199 (47.24%), Postives = 136/199 (68.34%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L++KVD L++GGG+  TF  A GH VG SL E D +  A  ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVDKVDQLIVGGGIANTFIAAAGHHVGKSLNEPDLIPTANQIVADAKTRGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XANAC (Phosphoglycerate kinase OS=Xanthomonas axonopodis pv. citri GN=pgk PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.412e-45
Identity = 94/199 (47.24%), Postives = 136/199 (68.34%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L+ KVD L++GGG+  TF  A GH+VG SL E D +  A  ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVNKVDQLIVGGGIANTFIAAAGHAVGKSLNEPDLIPTANRIVADAKARGAEIPLPTDVVVAKQFLPDAQASVKSLDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAQDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SILST (Phosphoglycerate kinase OS=Silicibacter sp. (strain TM1040) GN=pgk PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.412e-45
Identity = 96/200 (48.00%), Postives = 133/200 (66.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTK+ ++ +L+ KVD L++GGGM  TF  AQG  VG SL E D    A  +M +A++ G ++LLP+DVV+A +F A A+++ VPA A P   M LD GP ++ + S     +KT+IWNGP+G FE   F   T   A+K AEL+  G + ++ GGGD+VAA+ + G A+  S+IST GGA LE +EGK LPGV AL
Sbjct:  195 GAKVSTKLDLLGNLVAKVDTLVIGGGMANTFLAAQGIDVGKSLCEHDMTGTAKDIMARAEAAGCTILLPSDVVVAREFKAGADNETVPADACPADAMILDAGPASVAAISTVFAESKTLIWNGPLGAFEIAPFDIATNTAAQKAAELTKAGQLISVAGGGDTVAALNQAGAAEAFSYISTAGGAFLEWMEGKVLPGVAAL 394          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_SILPO (Phosphoglycerate kinase OS=Silicibacter pomeroyi GN=pgk PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 94/203 (46.31%), Postives = 135/203 (66.50%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVSTK+ ++ +L+EKVD L++GGGM  TF  A+G  VG SL E    D A  ++ KA++ G +++LP+DVV+A+KF + A  +++P    PD  M LD GPD++ +     + ++T+IWNGP+G FE + F A T A A K A L+  G + ++ GGGD+VAA+   G A   ++IST GGA LE +EGKTLPGV AL  A
Sbjct:  195 GAKVSTKLELLGNLIEKVDYLVIGGGMANTFLVAKGLPVGKSLAERIMKDTAAEILAKAEAAGCTIVLPSDVVVAEKFESHAPHQILPNDRCPDEGMILDAGPDSLAAIKAIFEKSRTLIWNGPLGAFELEPFDAATNAAALKAAALTRAGKLISVAGGGDTVAALNASGAAGDFTYISTAGGAFLEWMEGKTLPGVAALIQA 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MARAV (Phosphoglycerate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pgk PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 97/201 (48.26%), Postives = 133/201 (66.17%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSKVSTK+ V+ +L +  D +++GGG+  TF  A GH VG SL E D +D A  +  +     V + LP DVV+A +FA  A +     + + D  M LDVGP+    F+E L   KTI+WNGP+GVFEFD+F  GT+A+A+ +AE       ++ GGGD+VAAV+K G+ADK+S+ISTGGGA LE +EGKTLP V  L++
Sbjct:  191 GSKVSTKLDVLNALEKVCDQIIVGGGIANTFLAAAGHPVGKSLCEHDLIDTAKDIASR-----VEIPLPVDVVVASEFAETATATTKNISDVSDDDMILDVGPETAGQFAELLKNAKTILWNGPVGVFEFDQFGNGTKALAQAIAE---SDAFSLAGGGDTVAAVDKYGVADKISYISTGGGAFLEFVEGKTLPAVAVLEE 383          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_JANSC (Phosphoglycerate kinase OS=Jannaschia sp. (strain CCS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 95/203 (46.80%), Postives = 135/203 (66.50%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVSTK+ ++ +L+EKVD +++GGGM  TF  AQG  VG+SL E D  D A ++M+KA +   +L+LP D+V+A +F A A + V    A P   M LD GP  +++ +   +T KT+IWNGP+G FE   F A T   A+  AE +  G + ++ GGGD+VAA+   G+AD+ ++IST GGA LE +EGKTLPGV AL+ A
Sbjct:  191 GAKVSTKLDLLGNLIEKVDTIIIGGGMANTFLAAQGVQVGTSLCEHDLGDTARAIMQKAAAANCTLILPGDIVVAAEFKAGAANAVYDVDACPADQMILDAGPKTVETIAATFNTAKTVIWNGPLGAFEIAPFDAATVTAARAAAEETQAGKLISVAGGGDTVAALNHAGVADQFTYISTAGGAFLEWMEGKTLPGVAALEAA 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XYLFT (Phosphoglycerate kinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 91/199 (45.73%), Postives = 134/199 (67.34%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L+  V+ L+ GGG+  TF  A G+ +G SL E D ++ A  ++  AK++G  + LPTDVV+A +F     + V    AI    + LD+GP   + ++  ++T  T++WNGP+GVFEFD F+ GTE +A+ +A  S     +I GGGD++AA++K G+AD++S+ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVNNVEQLITGGGIANTFLAAAGYPIGKSLYEADLIETAREIITVAKARGAEIPLPTDVVVAKQFLPGVTATVKTVDAIVADDLILDIGPQTARHYAALIETAATVVWNGPVGVFEFDAFSKGTEVLARAVAASS---AFSIAGGGDTLAAIDKYGVADQISYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XANOR (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae GN=pgk PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L+ KVD L++GGG+  TF  A GH VG SL E D +  A  ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVNKVDQLIVGGGIANTFIAAAGHHVGKSLNEPDLIPTANQIVADAKTRGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SHEFN1.414e-4547.50Phosphoglycerate kinase OS=Shewanella frigidimarin... [more]
PGK_MARMS1.414e-4551.00Phosphoglycerate kinase OS=Marinomonas sp. (strain... [more]
PGK_XANOP2.412e-4547.24Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]
PGK_XANAC2.412e-4547.24Phosphoglycerate kinase OS=Xanthomonas axonopodis ... [more]
PGK_SILST2.412e-4548.00Phosphoglycerate kinase OS=Silicibacter sp. (strai... [more]
PGK_SILPO3.150e-4546.31Phosphoglycerate kinase OS=Silicibacter pomeroyi G... [more]
PGK_MARAV3.150e-4548.26Phosphoglycerate kinase OS=Marinobacter aquaeolei ... [more]
PGK_JANSC3.150e-4546.80Phosphoglycerate kinase OS=Jannaschia sp. (strain ... [more]
PGK_XYLFT4.114e-4545.73Phosphoglycerate kinase OS=Xylella fastidiosa (str... [more]
PGK_XANOR4.114e-4547.24Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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