CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XANOM (Phosphoglycerate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ ++ +L+ KVD L++GGG+  TF  A GH VG SL E D +  A  ++  AK++G  + LPTDVV+A +F  DA + V    A+    + LD+GP   + ++E + +  T++WNGP+GVFEF+ F+ GTE +A+ +A  S K   +I GGGD++AAV+K  +A  +++ISTGGGA LE LEGKTLP V AL
Sbjct:  191 GSKVSTKLELLSNLVNKVDQLIVGGGIANTFIAAAGHHVGKSLNEPDLIPTANQIVADAKTRGAEIPLPTDVVVAKQFLPDAEASVKALDAVDADDLILDIGPQTAQRYAELIASAGTVVWNGPVGVFEFESFSHGTETLARAIA--SSKAF-SIAGGGDTLAAVDKYDIAKDVTYISTGGGAFLEFLEGKTLPAVAAL 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOSK (Phosphoglycerate kinase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 96/200 (48.00%), Postives = 133/200 (66.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTK+ ++ +L+ +VD L++GGGM  TF  AQG  VG SL E D  D A  ++ KAK+ G ++ LP DVV+A +F A A ++ V  +A P   M LD GP  + + SE   + KT+IWNGP+G FE + F A T A A ++A+L+  G + ++ GGGD+VAA+ K G A+  S+IST GGA LE +EGK LPGV AL
Sbjct:  196 GAKVSTKLDLLGNLVGRVDHLVIGGGMANTFLVAQGIEVGKSLAERDMADTAREILSKAKAAGCTIHLPLDVVVAREFKAGAANETVETSACPADAMILDAGPKTVAALSEVFASAKTLIWNGPLGAFEIEPFDAATNAAALQVAQLTKAGQLISVAGGGDTVAALNKAGAAEGFSYISTAGGAFLEWMEGKELPGVAAL 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOS1 (Phosphoglycerate kinase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 96/200 (48.00%), Postives = 133/200 (66.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTK+ ++ +L+ +VD L++GGGM  TF  AQG  VG SL E D  D A  ++ KAK+ G ++ LP DVV+A +F A A ++ V  +A P   M LD GP  + + SE   + KT+IWNGP+G FE + F A T A A ++A+L+  G + ++ GGGD+VAA+ K G A+  S+IST GGA LE +EGK LPGV AL
Sbjct:  196 GAKVSTKLDLLGNLVGRVDHLVIGGGMANTFLVAQGIEVGKSLAERDMADTAREILSKAKAAGCTIHLPLDVVVAREFKAGAANETVETSACPADAMILDAGPKTVAALSEVFASAKTLIWNGPLGAFEIEPFDAATNAAALQVAQLTKAGQLISVAGGGDTVAALNKAGAAEGFSYISTAGGAFLEWMEGKELPGVAAL 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHOS4 (Phosphoglycerate kinase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.373e-45
Identity = 96/200 (48.00%), Postives = 132/200 (66.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTK+ ++ +L+ +VD L++GGGM  TF  AQG  VG SL E D  D A  ++ KAK+ G ++ LP DVV+A +F A A ++ V   A P   M LD GP  + + SE   + KT+IWNGP+G FE + F A T A A ++A+L+  G + ++ GGGD+VAA+ K G A+  S+IST GGA LE +EGK LPGV AL
Sbjct:  196 GAKVSTKLDLLGNLVGRVDHLVIGGGMANTFLVAQGIEVGKSLAERDMADTAREILSKAKAAGCTIHLPLDVVVAREFKAGAANETVETAACPADAMILDAGPKTVAALSEVFASAKTLIWNGPLGAFEIEPFDAATNAAALQVAQLTKAGQLISVAGGGDTVAALNKAGAAEGFSYISTAGGAFLEWMEGKELPGVAAL 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_OPISI (Phosphoglycerate kinase OS=Opisthorchis sinensis GN=PGK PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 7.017e-45
Identity = 98/204 (48.04%), Postives = 128/204 (62.75%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVS KI++I+++L+KVD L++ GGM FTF K      +G SL +E    +    M+ AKSK V + LP D +  DKFA DAN+        I D  MGLD GP  ++ F + +   KTI+WNGPMGVFE +KFA GT+A    +   + KGVT   GGGD+     K     ++SH+STG GASLELLEGK LPG+LAL DA
Sbjct:  212 GAKVSDKIQLIKNMLDKVDELIITGGMAFTFLKKLHNMKIGKSLYDEPGAAIVDEWMQLAKSKNVKIHLPVDFITGDKFAEDANTGTATVEPGIRDTHMGLDGGPKTMEEFCKVISRAKTIVWNGPMGVFEMEKFAGGTKAAMDAVVAATTKGVTNNNGGGDTATCCPKWKTEAQVSHVSTGVGASLELLEGKQLPGILALSDA 415          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_METEP (Phosphoglycerate kinase OS=Methylobacterium extorquens (strain PA1) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.017e-45
Identity = 91/200 (45.50%), Postives = 133/200 (66.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTKI ++E+L+ KVD+L++GGGM  TF  AQG  VG SL E+D  + A  ++  AK K  +++LP D ++A +F A+A ++ VP  A+P   M LDVG  +I +   A++  +T++WNGP+G FE   F  GT A+A+  A  +  G + ++ GGGD+VAA+   G+ +  S++ST GGA LE LEGK LPGV AL
Sbjct:  197 GAKVSTKIDLLENLVAKVDMLVIGGGMANTFLHAQGKDVGKSLCEKDLAETAKRILAAAKEKNCTIILPVDALVAREFKANAENETVPVDAVPSDAMILDVGASSIATIDGAIEEARTLVWNGPLGAFELTPFDTGTVAVAQHAARRTKAGQLVSVAGGGDTVAALNHAGVGEDFSYVSTAGGAFLEWLEGKELPGVEAL 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_METCA (Phosphoglycerate kinase OS=Methylococcus capsulatus GN=pgk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.017e-45
Identity = 95/200 (47.50%), Postives = 133/200 (66.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V++SL + VD L++GGG+  TF KA G +VG SL EED +  A  LME AK+KG  + +P DVV+  +F A   + V     I +  M LD+GP+  + ++E +    T++WNGP+GVFEFD+F  GT  +   +AE       +I GGGD++AA++K G+AD++S+ISTGGGA LE LEGK LP V  L+
Sbjct:  191 GSKVSTKLTVLDSLSQVVDQLIVGGGIANTFIKAAGFNVGKSLYEEDLVAEARRLMEAAKAKGGEIPVPVDVVVGKRFDAAEPAMVKSVADIAEDDMILDIGPETSRRYAEFIGRAGTVVWNGPVGVFEFDQFGEGTRRLGLAIAE---SHAFSIAGGGDTLAAIDKYGIADRISYISTGGGAFLEFLEGKQLPAVAMLE 387          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_METC4 (Phosphoglycerate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.017e-45
Identity = 91/200 (45.50%), Postives = 133/200 (66.50%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTKI ++E+L+ KVD+L++GGGM  TF  AQG  VG SL E+D  + A  ++  AK K  +++LP D ++A +F A+A ++ VP  A+P   M LDVG  +I +   A++  +T++WNGP+G FE   F  GT A+A+  A  +  G + ++ GGGD+VAA+   G+ +  S++ST GGA LE LEGK LPGV AL
Sbjct:  197 GAKVSTKIDLLENLVAKVDMLVIGGGMANTFLHAQGKDVGKSLCEKDLAETAKRILAAAKEKNCTIILPVDALVAREFRANAENETVPVDAVPSDAMILDVGASSIATIDGAIEEARTLVWNGPLGAFELTPFDTGTVAVAQHAARRTKAGQLVSVAGGGDTVAALNHAGVGEDFSYVSTAGGAFLEWLEGKELPGVEAL 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_HAHCH (Phosphoglycerate kinase OS=Hahella chejuensis (strain KCTC 2396) GN=pgk PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.017e-45
Identity = 98/199 (49.25%), Postives = 131/199 (65.83%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVSTK+ V+ SL E  D L++GGG+  TF  A  H VG SL E D LD A S+  K     V + LPTDVV A  F+  A + V P   + D  M LD+GP +  + +E L + KTI+WNGP+GVFEFD+F  GT+ +A+ +AE       +I GGGD++AA++K G+++K+S+ISTGGGA LE +EGKTLP V  L
Sbjct:  192 GSKVSTKLDVLNSLSEVCDQLIVGGGIANTFLAAADHKVGKSLCEMDLLDTARSIAAK-----VQIPLPTDVVTAKAFSESAEASVKPIAEVTDDDMILDIGPQSAAALAELLKSAKTILWNGPVGVFEFDQFGDGTKTLAQAIAE---SDAFSIAGGGDTLAAIDKYGVSEKISYISTGGGAFLEFVEGKTLPAVAML 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_XANFL (Phosphoglycerate kinase OS=Xanthobacter flavus GN=pgk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.197e-44
Identity = 91/200 (45.50%), Postives = 132/200 (66.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            GSKVS+K+ ++ +L++KVDIL++GGGM  TF  A G  VG SL E D  + A  +++KA++ G  ++LP D V+A +F A+A  +V     + D  M LD GP+ +    + LD  KT++WNGP G FE   F A T A+A+ + +L+ KG + ++ GGGD+VAA+   G A++ S++ST GGA LE LEGK LPGV AL
Sbjct:  196 GSKVSSKLELLGNLVKKVDILVIGGGMANTFLAALGKKVGKSLCEHDLANTARDILKKAEAAGCEIVLPVDAVVATEFKANAAHRVTSVDDVKDDEMMLDAGPETVGIVKQKLDGAKTVVWNGPFGAFEMTPFDAATVAVARYVGDLTHKGRLLSVAGGGDTVAALNHAGTAERFSYVSTAGGAFLEWLEGKALPGVEAL 395          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_XANOM4.114e-4547.24Phosphoglycerate kinase OS=Xanthomonas oryzae pv. ... [more]
PGK_RHOSK4.114e-4548.00Phosphoglycerate kinase OS=Rhodobacter sphaeroides... [more]
PGK_RHOS14.114e-4548.00Phosphoglycerate kinase OS=Rhodobacter sphaeroides... [more]
PGK_RHOS45.373e-4548.00Phosphoglycerate kinase OS=Rhodobacter sphaeroides... [more]
PGK_OPISI7.017e-4548.04Phosphoglycerate kinase OS=Opisthorchis sinensis G... [more]
PGK_METEP7.017e-4545.50Phosphoglycerate kinase OS=Methylobacterium extorq... [more]
PGK_METCA7.017e-4547.50Phosphoglycerate kinase OS=Methylococcus capsulatu... [more]
PGK_METC47.017e-4545.50Phosphoglycerate kinase OS=Methylobacterium chloro... [more]
PGK_HAHCH7.017e-4549.25Phosphoglycerate kinase OS=Hahella chejuensis (str... [more]
PGK_XANFL1.197e-4445.50Phosphoglycerate kinase OS=Xanthobacter flavus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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