CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_NITMU (Phosphoglycerate kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=pgk PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.940e-44
Identity = 92/200 (46.00%), Postives = 131/200 (65.50%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL EKVD L++GGG+  TF KA G +VG SL E+D + +A  LMEK   +  ++ +  DVV+  KF A   + +  A A+ D  M  D+GP + +  S+ +    T++WNGP+GVFEFD+F  GT+ IA  +A+       T+ GGGD++AA++K  + D++S+IST GGA LE LEGK LP V  L+
Sbjct:  192 GSKVSTKLTVLESLSEKVDQLVVGGGIANTFLKAAGQNVGKSLCEDDLVPIAKMLMEKMAKRNATIPIAVDVVVGKKFDASEPAVLKNADAVTDDDMIFDIGPKSARELSDIIMKAGTVVWNGPVGVFEFDQFGEGTKTIAMAIADTD---AFTLAGGGDTIAAIQKYDIYDRVSYISTAGGAFLEFLEGKKLPAVEILE 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CAUCR (Phosphoglycerate kinase OS=Caulobacter crescentus GN=pgk PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.940e-44
Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ +L+ K+D L +GGGM  TF  AQGH VG SL E+D  D A  +MEKAK+ G  LLLP DVV+A K A    + V   + +    + LD GP++ K    A+D + T+IWNGP+GVFE   F   T + AK  A L+  G +  + GGGD+VAA+   G++   + +ST GGA LE +EGKTLPGV AL+
Sbjct:  195 GSKVSTKLDLLNNLVAKLDRLAIGGGMANTFLFAQGHDVGGSLCEKDLADTAREIMEKAKAAGCELLLPVDVVVAKKVAPGVETAVRSLSEVQADDLILDAGPESAKRLLAAMDQSLTLIWNGPLGVFEVPPFDEATVSAAKHAASLAKSGKIVAVAGGGDTVAALNHAGVSADFTFVSTAGGAFLEWMEGKTLPGVAALE 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CAUCN (Phosphoglycerate kinase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=pgk PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.940e-44
Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ ++ +L+ K+D L +GGGM  TF  AQGH VG SL E+D  D A  +MEKAK+ G  LLLP DVV+A K A    + V   + +    + LD GP++ K    A+D + T+IWNGP+GVFE   F   T + AK  A L+  G +  + GGGD+VAA+   G++   + +ST GGA LE +EGKTLPGV AL+
Sbjct:  195 GSKVSTKLDLLNNLVAKLDRLAIGGGMANTFLFAQGHDVGGSLCEKDLADTAREIMEKAKAAGCELLLPVDVVVAKKVAPGVETAVRSLSEVQADDLILDAGPESAKRLLAAMDQSLTLIWNGPLGVFEVPPFDEATVSAAKHAASLAKSGKIVAVAGGGDTVAALNHAGVSADFTFVSTAGGAFLEWMEGKTLPGVAALE 395          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RALSO (Phosphoglycerate kinase OS=Ralstonia solanacearum GN=pgk PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.013e-43
Identity = 92/200 (46.00%), Postives = 134/200 (67.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ +++SL +KVD L++GGG+  TF  A G  +G SL E D +  A ++++   ++G S+ +P DVV A +F+A A + V     + D  M LD+GP      ++ L  + TI+WNGP+GVFEFD+F  GT+ +A+ +A  SG    +I GGGD++AA+ K G+AD++ +ISTGGGA LE LEGKTLP V  L+
Sbjct:  213 GSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLAEADLVGDAKAIIDLMAARGASVPIPVDVVCAKEFSATAAATVKDVKDVADDDMILDIGPKTAAQLADQLKASGTIVWNGPVGVFEFDQFGNGTKVLAEAIAASSG---FSIAGGGDTLAAIAKYGIADRVGYISTGGGAFLEFLEGKTLPAVEILE 409          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_ACIAC (Phosphoglycerate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.013e-43
Identity = 93/194 (47.94%), Postives = 130/194 (67.01%), Query Frame = -2
Query:  250 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLP 831
            GSKVSTK+ +++SL +KVD L++GGG+  TF  A G S+G SL E D +  A +++E  K++G  + +PTDVV+A  F+ADA + V  AT + D  + LD+GP      +  L    TI+WNGP+GVFEF  F  GT+AIA+ +AE       +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP
Sbjct:  196 GSKVSTKLTILKSLSDKVDQLIVGGGIANTFMLAAGLSIGKSLAEPDLVSEAKAVIEAMKARGAEVPIPTDVVVAKTFSADAPATVKAATDVADDDLILDIGPQTAAKLAAQLKAAGTIVWNGPVGVFEFPAFENGTKAIAQAIAE---SPAFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLP 386          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_GRABC (Phosphoglycerate kinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.728e-43
Identity = 89/200 (44.50%), Postives = 130/200 (65.00%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS-GKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVSTK+ ++ +L  KVD+L++GG M  TF  AQG  VG SL E +  D A +++E AK  G  +LLP D V A +F AD  ++ V    IPD  M LDVGP+ ++  +E L   KT++WNGP+G FE   F   T A+A+ +A L+   G+ ++ GGGD+VAA++  G+ ++++++S  GGA LE +EGK LPGV  L
Sbjct:  195 GAKVSTKLDLLGNLSTKVDVLVIGGAMANTFLAAQGIKVGKSLQEAEMHDTARAILETAKKAGCEILLPVDAVTATEFRADPPTRTVSINEIPDDAMMLDVGPETVRLLTERLSGVKTLVWNGPLGAFEISPFDKATVALAQSVAGLTETAGLVSVAGGGDTVAALKHAGVVERLTYVSAAGGAFLEWMEGKELPGVAVL 394          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DESAP (Phosphoglycerate kinase OS=Desulforudis audaxviator (strain MP104C) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.728e-43
Identity = 91/201 (45.27%), Postives = 130/201 (64.68%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+K+S KI V+E L+EK D LL+GGGM  TF  AQGH++ +SLVE D+L+ A  L+ KA   G  + LP D+V+A           V   +IP GW   D+G   ++ ++  L   +TI WNGP+G+FE   F  GT  +A+ +A       TT++GGGD+VAAV++ G+ D+++H+STGGGASL+LLEG+ LPGV  L +
Sbjct:  196 GAKISDKIGVLERLIEKADYLLVGGGMANTFLAAQGHNLQASLVEADRLETARYLLAKA-GPGERITLPIDLVVAPDREQPEKRATVAVESIPAGWAAFDLGSGTVRLYANRLRPARTIFWNGPVGLFEVPGFDRGTLDLARVIAAAEA---TTVVGGGDTVAAVKQAGVLDQVTHVSTGGGASLKLLEGRELPGVAVLQN 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_ACISJ (Phosphoglycerate kinase OS=Acidovorax sp. (strain JS42) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.728e-43
Identity = 91/196 (46.43%), Postives = 133/196 (67.86%), Query Frame = -2
Query:  244 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGV 831
            GSKVSTK+ +++SL + VD L++GGG+  TF  A G  +G SL E D ++ A +++    ++G  + +PTDVV+A  FAADA + V  A+ + +  + LD+GP+     +  L    TI+WNGP+GVFEFD+FA GT+AIA+ +AE S     +I GGGD++AA+ K G+   + +ISTGGGA LE+LEGKTLP +
Sbjct:  196 GSKVSTKLTILQSLSKNVDGLVVGGGIANTFMLAAGLPIGKSLAEPDLVNEAKAVIAAMAARGAEVPIPTDVVVAKAFAADAPATVKKASEVAEDDLILDIGPETAAQLAAQLKAAGTIVWNGPVGVFEFDQFAGGTKAIAQAIAESS---AFSIAGGGDTLAAIAKYGIEKDVGYISTGGGAFLEVLEGKTLPAI 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_AERHH (Phosphoglycerate kinase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=pgk PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.257e-43
Identity = 92/200 (46.00%), Postives = 132/200 (66.00%), Query Frame = -2
Query:  232 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 831
            GSKVSTK+ V+ESL +  D L++GGG+  TF  A GH+VG SL E D +D A  L  +      ++ + TDVV+  +F+    + +     + DG M  D+GPD+ K+ ++ +   KTI+WNGP+GVFEFD+FA GT+ IA+ +A        +I GGGD++AA++K G+ADK+S+ISTGGGA LE +EGK LP V  L+
Sbjct:  191 GSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAAGHNVGKSLCEHDLIDTAKKLAAET-----NIPVTTDVVVGAEFSESTPATIKSVADVTDGDMIFDIGPDSAKALADIIMNAKTILWNGPVGVFEFDQFAEGTKVIAEAIA---ASPAFSIAGGGDTLAAIDKFGIADKVSYISTGGGAFLEFVEGKVLPAVAILE 382          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_RHILW (Phosphoglycerate kinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pgk PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.948e-43
Identity = 92/203 (45.32%), Postives = 135/203 (66.50%), Query Frame = -2
Query:  226 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKG-VTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 831
            G+KVSTKI ++ +L++KVD L++GGGM  TF  A+G +VG SL E D  + A  +M +A + G +++LP D VIA +F A A ++ V   AIP   M LDVGP ++++ S  ++   T++WNGP+G FE + F A T   AK  AE +  G +T++ GGGD+V+A+   G+AD  +++ST GGA LE +EGK LPGV  L+ A
Sbjct:  197 GAKVSTKIDLLMNLVKKVDALVIGGGMANTFIAARGTNVGKSLCEHDLAETARQIMIEAATSGCAIILPEDGVIAREFKAGAANETVDIDAIPADAMVLDVGPKSVQAISAWIERASTLVWNGPLGAFEIEPFDAATVGAAKYAAERTTAGKLTSVAGGGDTVSALNHAGVADDFTYVSTAGGAFLEWMEGKELPGVAVLNAA 399          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_NITMU5.940e-4446.00Phosphoglycerate kinase OS=Nitrosospira multiformi... [more]
PGK_CAUCR5.940e-4447.26Phosphoglycerate kinase OS=Caulobacter crescentus ... [more]
PGK_CAUCN5.940e-4447.26Phosphoglycerate kinase OS=Caulobacter crescentus ... [more]
PGK_RALSO1.013e-4346.00Phosphoglycerate kinase OS=Ralstonia solanacearum ... [more]
PGK_ACIAC1.013e-4347.94Phosphoglycerate kinase OS=Acidovorax avenae subsp... [more]
PGK_GRABC1.728e-4344.50Phosphoglycerate kinase OS=Granulibacter bethesden... [more]
PGK_DESAP1.728e-4345.27Phosphoglycerate kinase OS=Desulforudis audaxviato... [more]
PGK_ACISJ1.728e-4346.43Phosphoglycerate kinase OS=Acidovorax sp. (strain ... [more]
PGK_AERHH2.257e-4346.00Phosphoglycerate kinase OS=Aeromonas hydrophila su... [more]
PGK_RHILW2.948e-4345.32Phosphoglycerate kinase OS=Rhizobium leguminosarum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
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