CX069492

Overview
NameCX069492
Unique NameCX069492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:97..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.350e-63
Identity = 118/201 (58.71%), Postives = 156/201 (77.61%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +LL KVD L++GGGM  TF KAQG+++G SLVEED++ LA  L++ A  KGV +LLP D+V+A +F ADA  +VV   A+PDGWM LD+GP+  ++++ AL+  +T++WNGPMGVFE + FA GTEA+A+ +A + G    TI+GGGDSVAAVEK+G+A K+ HISTGGGASLE LEGK LPGV+AL +
Sbjct:  195 GAKVSDKISVIRNLLTKVDTLIIGGGMANTFLKAQGYAMGKSLVEEDQVPLAQELIQLAAQKGVKMLLPRDLVVAQEFKADAPHQVVAVNAVPDGWMALDIGPETARAYAGALEGARTVVWNGPMGVFEMEAFAHGTEAVARAVAAVDG---MTIVGGGDSVAAVEKMGVAGKIGHISTGGGASLEFLEGKALPGVVALTE 392          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DEIDV (Phosphoglycerate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=pgk PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.714e-63
Identity = 120/199 (60.30%), Postives = 156/199 (78.39%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI+VIE+LL KVD +L+GGGM+FTF KA+G  +G+SLVE+D++D A  L+E+   K   L+LPTD V AD+FAADA+++VVPA  IP+GWMGLD+GPD  ++++EAL   KT+ WNGPMGVFEF  FAAGT A+A  +  L  +   T++GGGDSV+A+ K G AD++ HISTGGGASLELLEGK LPGV A+
Sbjct:  194 GAKVSDKIKVIENLLPKVDRMLIGGGMMFTFIKARGGVIGNSLVEDDQVDYARGLLEQFGDK---LMLPTDAVAADRFAADADTRVVPADQIPEGWMGLDIGPDTQQAYTEALRGAKTVFWNGPMGVFEFPAFAAGTNAVAAAVGSLKNQAY-TVVGGGDSVSAINKSGKADQIDHISTGGGASLELLEGKALPGVEAM 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGKT_THEMA (Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk/tpi PE=1 SV=4)

HSP 1 Score: 241.121 bits (614), Expect = 5.714e-63
Identity = 119/202 (58.91%), Postives = 146/202 (72.28%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DLA  L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ I+ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL DK SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  195 GAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THESQ (Phosphoglycerate kinase OS=Thermotoga sp. (strain RQ2) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.462e-63
Identity = 118/202 (58.42%), Postives = 146/202 (72.28%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DLA  L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ ++ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL DK SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  195 GAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_PROA2 (Phosphoglycerate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.462e-63
Identity = 117/201 (58.21%), Postives = 152/201 (75.62%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+K+S KI V+++L +KVD +L+GG MIFTF+KAQG+ VG+SLVEEDK++LA  L+EKA +K + +LLP DV+ A  F+ADA +  VP  +IP+  MGLD+GP  I ++S  +   +TI+WNGPMGVFE D FA GT AIA  LA+ + KG  +IIGGGDS AAV K GL   ++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  197 GAKISGKIDVLDNLFDKVDTILIGGAMIFTFFKAQGYQVGTSLVEEDKIELAKHLLEKAAAKNIRMLLPEDVIAASAFSADAETATVPIDSIPETMMGLDIGPKTIDTYSREILKARTIVWNGPMGVFEIDAFATGTIAIAHALADATAKGAISIIGGGDSAAAVMKAGLESGITHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACSK (Phosphoglycerate kinase OS=Bacillus clausii (strain KSM-K16) GN=pgk PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.746e-63
Identity = 119/201 (59.20%), Postives = 149/201 (74.13%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VI++LL+KVD L++GGG+ +TF KAQG+ VG SL+EEDKLDLA   MEKA+ KGV   +P DV++AD F+ DAN K V  + IP  W  LD+GP   K++   L  +K +IWNGPMGVFE + FA GT+A+A  LAE S     ++IGGGDS AAVE+ GLADKMSHISTGGGASLE +EGK LPGV+AL +
Sbjct:  195 GAKVKDKIGVIDNLLDKVDNLIIGGGLAYTFVKAQGYEVGKSLLEEDKLDLAKQFMEKAEQKGVKFYMPEDVIVADDFSDDANKKEVAISGIPADWEALDIGPKTRKTYEAVLKASKLVIWNGPMGVFELESFAGGTKAVANALAEAS--DTYSVIGGGDSAAAVEQFGLADKMSHISTGGGASLEFMEGKELPGVVALSE 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.273e-62
Identity = 116/201 (57.71%), Postives = 151/201 (75.12%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KV  KI VIE+LL+KVD L++GGG+ +TF KAQGH +G SL+E DK+DLA S MEKAK KGV+  +P D ++AD F+ DAN+K V    IP  W  LD+GP   +++   + ++K +IWNGPMGVFE D FA GT+A+A+ LA+       ++IGGGDS AAVEK GLA++MSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  195 GAKVKDKIGVIENLLDKVDNLIIGGGLAYTFIKAQGHEIGKSLLEADKMDLALSFMEKAKEKGVNFYVPQDAIVADDFSNDANTKAVDIDQIPADWEALDIGPKTRETYRNVIQSSKLVIWNGPMGVFELDAFAGGTKAVAEALAD--ANDTYSVIGGGDSAAAVEKFGLANQMSHISTGGGASLEFMEGKALPGVVALND 393          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.662e-62
Identity = 117/202 (57.92%), Postives = 146/202 (72.28%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            G+KVS KI VI +L+EK D +L+GG M+FTF KA G  VGSS VEEDK+DLA  L+EKAK KGV ++LP D VIA K       KVV     IP+GWMGLD+GP+ ++ F + L   KT++WNGPMGVFE D FA GT+ +A  +A L+ KG  T++GGGDS AAV K GL D+ SH+STGGGASLE LEGK LPG+ ++ D
Sbjct:  195 GAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELLEKAKEKGVEIVLPVDTVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETVELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDRFSHVSTGGGASLEFLEGKELPGIASIAD 396          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_DEIGD (Phosphoglycerate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.171e-62
Identity = 119/199 (59.80%), Postives = 156/199 (78.39%), Query Frame = -2
Query:  235 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 831
            G+KVS KI+VIE+LL +VD +L+GGGM+FTF +A+G  +G+SLVEED++  A  L+E+    G  L+LPTD V AD+FA DA ++VVPA  IPDGWMGLD+GP+  ++++EAL   KT+ WNGPMGVFEF  FAAGT A+A+ +AEL G    T++GGGDSV+A+ + G A K+SHISTGGGASLELLEG+ LPGV A+
Sbjct:  194 GAKVSDKIKVIENLLPRVDRMLIGGGMMFTFIRARGGQIGNSLVEEDQVAYARQLLEQY---GDRLMLPTDAVAADRFAPDAQTRVVPADRIPDGWMGLDIGPETARAYAEALQGAKTVFWNGPMGVFEFPAFAAGTNAVAQAVAEL-GNQAYTVVGGGDSVSAINQSGQASKVSHISTGGGASLELLEGQLLPGVEAM 388          
BLAST of CX069492 vs. ExPASy Swiss-Prot
Match: PGK_CHLCH (Phosphoglycerate kinase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgk PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.171e-62
Identity = 111/201 (55.22%), Postives = 155/201 (77.11%), Query Frame = -2
Query:  229 GSKVSTKIRVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 831
            GSK+S KI V+E+L +KVD +L+GG M+FTF+KAQG+ VG SLVEE K++LA S++E+AK+KG+ LLLPTDVV+  + +ADA S V     +P+  +G+D+GP+   ++   +   +T++WNGPMGVFE D FA GT A+A+ LA+ + +G TTI+GGGDS AA+ K GLA +++HISTGGGASLE LEGK LPG+ AL++
Sbjct:  197 GSKISGKIDVLENLFKKVDTVLIGGAMVFTFFKAQGYEVGKSLVEESKIELALSILEQAKAKGIKLLLPTDVVVTAEISADAESSVASIADMPNNLIGVDIGPETAAAYRNEIIGARTVLWNGPMGVFELDNFATGTIAVAQALADATAQGATTIVGGGDSAAAIAKAGLASEITHISTGGGASLEFLEGKELPGIAALNN 397          
The following BLAST results are available for this feature:
BLAST of CX069492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_MOOTA3.350e-6358.71Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_DEIDV5.714e-6360.30Phosphoglycerate kinase OS=Deinococcus deserti (st... [more]
PGKT_THEMA5.714e-6358.91Bifunctional PGK/TIM OS=Thermotoga maritima GN=pgk... [more]
PGK_THESQ7.462e-6358.42Phosphoglycerate kinase OS=Thermotoga sp. (strain ... [more]
PGK_PROA27.462e-6358.21Phosphoglycerate kinase OS=Prosthecochloris aestua... [more]
PGK_BACSK9.746e-6359.20Phosphoglycerate kinase OS=Bacillus clausii (strai... [more]
PGK_BACHD1.273e-6257.71Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]
PGK_THEP11.662e-6257.92Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_DEIGD2.171e-6259.80Phosphoglycerate kinase OS=Deinococcus geothermali... [more]
PGK_CHLCH2.171e-6255.22Phosphoglycerate kinase OS=Chlorobium chlorochroma... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_10G07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10G07-M14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069492 ID=CX069492; Name=CX069492; organism=Citrus sinensis; type=EST; length=832bp
GAAACTTATAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAG
AAAAATGCATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTT
ACAGCATCTACAAAACCAACTCTAATGATAAAGTTTAACTTTATCCACTC
TGGGCTGACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAA
AAGGAAAGTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCA
GGGAGTGTTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGA
GATATGGCTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTG
AGTCACCTCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCTCCGCA
AGCTTCTTGGCAATTGCCTCAGTGCCAGCAGCAAATTTATCAAATTCAAA
CACACCCATAGGTCCATTCCAGATGATGGTTTTAGTAGTATCCAAAGCTT
CACTGAATGACTTGATGGCATCAGGTCCAACATCCAAGCCCATCCAACCA
TCTGGAATTGCCGTTGCTGGCACCACCTTGCTGTTGGCATCAGCAGCAAA
CTTGTCAGCAATAACAACATCAGTAGGGAGCAGAAGAGACACCCCTTTAG
ATTTGGCCTTCTCCATAAGTGACGTAGCGAGATCAAGCTTGTCTTCCTCA
ACAAGGGATGAACCAACAGAGTGTCCTTGGGCCTTGTAAAAGGTAAAGAT
CATTCCTCCACCGAGCAATAGAATGTCAACCTTCTCCAAAAGTGATTCAA
TAACACGGATCTTAGTTGACACCTTTGAACCA
back to top