CX069470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_FRATF (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rplB PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.056e-34 Identity = 71/148 (47.97%), Postives = 99/148 (66.89%), Query Frame = 2 Query: 365 KIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 K M ++ ++ +G+CMPL + +GT+IHNIE+ P +G +++R+AGT A+++ + +++ ++RL SG + + CRA IG VSN H K L KAG RW G RP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K Sbjct: 113 KDMSVISGEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKD-NAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK 255
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_FRAT1 (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rplB PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.056e-34 Identity = 71/148 (47.97%), Postives = 99/148 (66.89%), Query Frame = 2 Query: 365 KIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 K M ++ ++ +G+CMPL + +GT+IHNIE+ P +G +++R+AGT A+++ + +++ ++RL SG + + CRA IG VSN H K L KAG RW G RP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K Sbjct: 113 KDMSVISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKD-NAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK 255
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_FRAP2 (50S ribosomal protein L2 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplB PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.056e-34 Identity = 71/148 (47.97%), Postives = 99/148 (66.89%), Query Frame = 2 Query: 365 KIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 K M ++ ++ +G+CMPL + +GT+IHNIE+ P +G +++R+AGT A+++ + +++ ++RL SG + + CRA IG VSN H K L KAG RW G RP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K Sbjct: 113 KDMSVVSGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKD-NAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK 255
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRSV (50S ribosomal protein L2 OS=Streptococcus sanguinis (strain SK36) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.298e-34 Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+G V N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ + TPWGKP Sbjct: 125 KVGNALPLANIPVGTLVHNIELKPGRGGELVRAAGASAQVLGQE-GKYTLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRGC (50S ribosomal protein L2 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.298e-34 Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+G V N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ + TPWGKP Sbjct: 125 KVGNALPLANIPVGTLVHNIELKPGRGGELVRAAGASAQVLGQE-GKYTLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_DINSH (50S ribosomal protein L2 OS=Dinoroseobacter shibae (strain DFL 12) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.298e-34 Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P++ V DK++ DI G+ MP + M IGTI+HNIE+ PG+GG++ RAAGT A+ + + +RL SG +L+ C AT+G VSNP + + L KAG++R G RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 107 PQRTAVGDKVVASQK-ADIKP--GNAMPFSGMPIGTIVHNIELKPGKGGQIARAAGTYAQFVGRD-GGYAQIRLSSGELRLVRQECMATVGAVSNPDNSNQNLGKAGRNRHKGIRPSVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_CALS8 (50S ribosomal protein L2 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.298e-34 Identity = 70/141 (49.65%), Postives = 99/141 (70.21%), Query Frame = 2 Query: 380 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 M+ D + ++G+ +PL + +GT+IHNIE+ PG+GG+LV++AG A+++ + + L+RLPSG + + CRATIG V N H ++ KAG+ RW+G RP VRG AMNPVDHPHGGGEG++ G+ G LTPWGKP Sbjct: 118 MSGPDADIKVGNALPLKYIPVGTMIHNIELYPGRGGQLVKSAGAVAQLMAKE-GKYALIRLPSGELRYVSQECRATIGQVGNLDHENVRIGKAGRKRWMGIRPTVRGSAMNPVDHPHGGGEGKA-PIGHPG--PLTPWGKP 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_BREBN (50S ribosomal protein L2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.298e-34 Identity = 77/154 (50.00%), Postives = 99/154 (64.29%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 P V D+I+ + D + +IG+ +P+ + +GT IHNIE+ PG+GG+LVRAAGTSA++L F +VRL SG + I CRATIG V N H + KAG+SRWLG RP VRG MNP DHPHGGGEGR+ + +TPWGKP Sbjct: 107 PHNLKVGDQIV---SGADADIKIGNALPMEKIPVGTTIHNIELKPGKGGQLVRAAGTSAQLLGRD-GEFVIVRLSSGETRRIHNVCRATIGQVGNLDHELLNIGKAGRSRWLGIRPTVRGSVMNPNDHPHGGGEGRAPIG---RKAPVTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRZT (50S ribosomal protein L2 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rplB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.919e-34 Identity = 71/133 (53.38%), Postives = 91/133 (68.42%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 ++G+ +PLA + +GT+IHNIE+ PG+GG+LVRAAG SA++L + LVRL SG ++I CRAT+G V N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ + TPWGKP Sbjct: 125 KVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLGSE-GKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRZP (50S ribosomal protein L2 OS=Streptococcus pneumoniae (strain P1031) GN=rplB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.919e-34 Identity = 71/133 (53.38%), Postives = 91/133 (68.42%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 ++G+ +PLA + +GT+IHNIE+ PG+GG+LVRAAG SA++L + LVRL SG ++I CRAT+G V N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ + TPWGKP Sbjct: 125 KVGNALPLANIPVGTLIHNIELKPGRGGELVRAAGASAQVLGSE-GKYVLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253 The following BLAST results are available for this feature:
BLAST of CX069470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069470 ID=CX069470; Name=CX069470; organism=Citrus sinensis; type=EST; length=808bpback to top |