CX069470

Overview
NameCX069470
Unique NameCX069470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRS7 (50S ribosomal protein L2 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + +IG+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRAT+GTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKIGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATVGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPZ (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPM (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M28 GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPG (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPF (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGVRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPD (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPC (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRPB (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRP8 (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M18 GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
[Close]
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRP6 (50S ribosomal protein L2 OS=Streptococcus pyogenes serotype M6 GN=rplB PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.013e-33
Identity = 70/137 (51.09%), Postives = 93/137 (67.88%), Query Frame = 2 
Query:  392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802
            D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRATIGTV N       + KAG+SRW G RP VRG  MNP DHPHGGGEG++       +   TPWGKP
Sbjct:  121 DADIKVGNALPLANIPVGTVVHNIELKPGKGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATIGTVGNEQQSLVNIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
The following BLAST results are available for this feature:
BLAST of CX069470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_STRS72.013e-3351.0950S ribosomal protein L2 OS=Streptococcus equi sub... [more]
RL2_STRPZ2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPM2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPG2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPF2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPD2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPC2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRPB2.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRP82.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]
RL2_STRP62.013e-3351.0950S ribosomal protein L2 OS=Streptococcus pyogenes... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10F07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10F07-K14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069470 ID=CX069470; Name=CX069470; organism=Citrus sinensis; type=EST; length=808bp
CTCACTTAGAAAAACTCTCACGGTGGCCGTCACCTTTCTTCTCAGTGTGA
TCACCCATCTTTCAATTCCACAGCATTCTTTTCTCAGCCGTGGGGTGCTT
TAGCTTCTGTCACCGCCGGCAACATGTTGTGATAGACAGTGAAATCAACA
GAAGAAAACAAAACGTAGGAGAAAGAGACACAGAAAGAGATCAGCAGAAA
TGGCTTTGTGCAGAGTACGCTCAGCTTCATCGACGCTCTTCAACAGGCTT
CTCTGTCCTTCCGTTCTCAACAACAACACTACTTATCGCTATCAGTCCTC
TGAAACCGAATTAGTTGGTGATCCTTCAAAACAAGAAAAACCAAAAAAAG
AAACTGTGCGTGATAAGATAATGAGACAGATGGCTCATGTTGATATAAAT
TCTCAAATTGGAAGTTGCATGCCACTTGCTTGTATGCGTATTGGGACCAT
CATTCACAACATTGAGGTAAACCCAGGACAAGGTGGCAAGCTAGTTAGAG
CTGCGGGGACGTCAGCCAAGATTTTGAAAGAACCCACTTCAAGCTTCTGT
TTAGTAAGACTACCTTCTGGTAATGAGAAACTGATTGACACTAGATGTCG
AGCCACCATTGGTACAGTGTCTAACCCAAGCCATGGAGCTAAGAAGCTTA
GGAAGGCTGGTCAGAGCCGTTGGTTGGGTCGAAGACCTGTGGTTAGAGGA
GTAGCCATGAATCCAGTTGATCATCCTCATGGTGGAGGTGAGGGACGAAG
CAAAAGTAGTGGTAACCATGGACGGTGTTCACTTACACCTTGGGGCAAGC
CTTGCAAG
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