CX069470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_BACWK (50S ribosomal protein L2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.541e-36 Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKP 802 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP Sbjct: 114 MEVMSGPESDIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_NEOSM (50S ribosomal protein L2 OS=Neorickettsia sennetsu (strain Miyayama) GN=rplB PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.318e-36 Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = 2 Query: 410 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 G+CMPL + +GT +HN+E+ PG GG+LVR+AG+SA+++ ++ LV LPSG ++LI + C ATIG VSN KL KAG+SRWLGRRP VRGVAMNPVDHP GGGEG K+SG GR ++PWG P K Sbjct: 132 GACMPLGKVPLGTTVHNVELKPGAGGQLVRSAGSSARVIARD-GNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGRSRWLGRRPSVRGVAMNPVDHPMGGGEG--KTSG--GRHPVSPWGFPTK 259
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_DICT6 (50S ribosomal protein L2 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplB PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.318e-36 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 2 Query: 380 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 M+ +++ +IG+ +PL + GT+IHN+E+ PG+GG+LVRAAGT+A+IL + + VRLPSG +L D CRATIG VSN H L KAG+SRWLGRRP VRG AMNPVDHPHGGGEG++ LTPWGKP Sbjct: 117 MSGENVDIKIGNNLPLKNIPDGTLIHNLELYPGRGGQLVRAAGTAAQILGKE-GKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRGSAMNPVDHPHGGGEGKAPIG---HPSPLTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_THETN (50S ribosomal protein L2 OS=Thermoanaerobacter tengcongensis GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.660e-36 Identity = 74/137 (54.01%), Postives = 102/137 (74.45%), Query Frame = 2 Query: 392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 +++ ++G+ +PL + +GTI+HNIE+ PG+GG+LVRAAG +A+++ + + +R+PSG +LI+ CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ G+ G LTPWGKP Sbjct: 121 NVDIKVGNALPLRNIPVGTIVHNIELIPGKGGQLVRAAGAAAQLMAKE-GDYVHIRMPSGEIRLINANCRATIGQVSNIDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA-PIGHPG--PLTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_RHORT (50S ribosomal protein L2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.660e-36 Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 2 Query: 410 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 G+ MPL M +GTIIHN+E+ PG+GG+L R+AG A+++ + + + +RL SG +L+ C AT+G VSNP + +KL KAG+SRW+GRRP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 127 GNAMPLKNMPVGTIIHNVEMKPGKGGQLARSAGCYAQLIGKD-AGYAQLRLSSGELRLVRGECLATVGAVSNPDNQNEKLGKAGRSRWMGRRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_RHOPS (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.660e-36 Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P++ +V D ++ ++VD+ G+ MPL M +GTI+HNIE+ G+GG++ R+AGT A+++ + +VRL SG ++L+ RC ATIG VSNP H + KAG+ RWLGRRP RGV MNP+DHPHGGGEGR+ GR +TPWGKP K Sbjct: 107 PQRLSVGDSVIAG-SYVDVKP--GNVMPLGNMPVGTIVHNIELKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRKRWLGRRPHNRGVVMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_PARL1 (50S ribosomal protein L2 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.660e-36 Identity = 69/133 (51.88%), Postives = 95/133 (71.43%), Query Frame = 2 Query: 410 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 G+ MPLA + +GTI+HN+E+ PG+GG++ R+AGT +++ + L+RL SG ++++ C A+IG VSNP H + KAG++RWLG+RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 127 GNAMPLANIPVGTIVHNVEMKPGKGGQIARSAGTYVQLVGRD-QGYALLRLSSGEQRMVPATCMASIGAVSNPDHSNITIAKAGRNRWLGKRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.392e-36 Identity = 75/156 (48.08%), Postives = 106/156 (67.95%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P++ V D ++ A +++ + G+ MPL M +GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP HG KAG+SRW G+RP VRGVAMNPVDHPHGGGEGR+ GR ++PWGKP K Sbjct: 107 PQRLGVGDSVV---AGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-HGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVSPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.654e-36 Identity = 76/156 (48.72%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P+K +V ++++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG K+SG GR +TPWG P K Sbjct: 107 PQKLSVGNRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMQVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGFPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_RHISN (50S ribosomal protein L2 OS=Rhizobium sp. (strain NGR234) GN=rplB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.654e-36 Identity = 75/156 (48.08%), Postives = 103/156 (66.03%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P++ DK++ VD+ G+ MPL + +G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 107 PQRLAAGDKVIASDKAVDVKP--GNTMPLQFIPVGSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 255 The following BLAST results are available for this feature:
BLAST of CX069470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069470 ID=CX069470; Name=CX069470; organism=Citrus sinensis; type=EST; length=808bpback to top |