CX069470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_PELTS (50S ribosomal protein L2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35 Identity = 73/137 (53.28%), Postives = 94/137 (68.61%), Query Frame = 2 Query: 392 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 D + + G+C+PL + +GT+IHNIE+ P GGKLVR+AG SA+++ + + +R+PSG +L+ CRATIG V N H + KAG+ RWLG RP VRGV MNPVDHPHGGGEGRS GR +TPWGKP Sbjct: 121 DADIKAGNCLPLKNIPVGTMIHNIELYPNGGGKLVRSAGASAQLMAKE-GKYANIRMPSGEMRLLLQECRATIGQVGNVEHENITIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGEGRSPI----GRNPVTPWGKP 252
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_ORITB (50S ribosomal protein L2 OS=Orientia tsutsugamushi (strain Boryong) GN=rplB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35 Identity = 81/156 (51.92%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P+ V DKI+ +IN +G+C+ L + +GTIIHNIE+ PG+GG++ R+AGT A +L + S + ++L SG + I RAT+G+VSN H KAG+ RWLGRRPVVRGVAMNPVDHPHGGGEG K+SG GR +TPWGK K Sbjct: 107 PRNLNVGDKIISS-DKAEIN--VGNCLSLEVIPVGTIIHNIEIKPGKGGQIARSAGTYAVLLNKD-SGYAQIKLRSGEVRRISLASRATVGSVSNIDHKNISYGKAGRVRWLGRRPVVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGKKTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_EXISA (50S ribosomal protein L2 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35 Identity = 76/144 (52.78%), Postives = 98/144 (68.06%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 M M+ + + ++G+ +PL + +GT IHNIE+ PG+GG+LVRAAG SA+I + + +VRL SG +L CRATIG+V N H + KAG+SRWLG+RP VRG MNPVDHPHGGGEGR+ G G LTPWGKP Sbjct: 114 MEIMSGPEADIKVGNALPLVNIPVGTTIHNIELKPGKGGQLVRAAGASAQI-QGRDGKYVIVRLQSGESRLFLGTCRATIGSVGNEEHELVNIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRA-PIGRSG--PLTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_RHOP2 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.258e-35 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 341 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 P++ V D ++ A+VD+ G+ MPL M IGTI+HN+E+ G+GG++ R+AGT A+++ + ++RL SG ++L+ RC ATIG VSNP H + KAG++RWLG RP RGV MNP+DHPHGGGEGR+ GR +TPWGKP K Sbjct: 107 PQRLAVGDTVIAG-AYVDVKP--GNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGRD-HDYVIMRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRSY (50S ribosomal protein L2 OS=Streptococcus suis (strain 05ZYH33) GN=rplB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ + TPWGKP Sbjct: 125 KVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_STRS2 (50S ribosomal protein L2 OS=Streptococcus suis (strain 98HAH33) GN=rplB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 404 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 802 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ + TPWGKP Sbjct: 125 KVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKAPVG---RKAPSTPWGKP 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_GLUDA (50S ribosomal protein L2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplB PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 74/142 (52.11%), Postives = 98/142 (69.01%), Query Frame = 2 Query: 383 AHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 A VDI G+ MPL+ + +GTI+HNIE+ G GGK+ R+AGT A+++ + S + ++L SG +++ C ATIG VSNP + + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 120 ARVDIKP--GNAMPLSAIPVGTIVHNIELKQGAGGKMARSAGTYAQLVGKD-SGYAQIKLQSGELRVVRGECMATIGAVSNPDNMNQHMGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_SULSY (50S ribosomal protein L2 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 2 Query: 380 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 MA D ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAG SA+IL + +RLPSG +L+ +C ATIG V H +L KAG+SRWLG RP VRG AMNP DHPHGGGEGR+ G+ ++PWG P K Sbjct: 117 MAGPDAEIKVGNALPLENIPVGTLVHNIELTPGKGGQLVRAAGMSAQILGRE-GDYVQIRLPSGELRLVYKKCMATIGAVGLAEHELLELGKAGRSRWLGIRPTVRGTAMNPADHPHGGGEGRT-----FGKHPVSPWGLPTK 253
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_GRABC (50S ribosomal protein L2 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplB PE=3 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34 Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 2 Query: 410 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCK 808 G+ MPL + +GTIIHNIE+ PG GGK+ R+AGT A+++ + + + ++L SG +++ C AT+G VSNP + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K Sbjct: 127 GNAMPLGAIPVGTIIHNIEMKPGAGGKIARSAGTYAQLVGKD-AGYAQIKLMSGELRVVRAECYATVGAVSNPDNSNIHIGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK 254
BLAST of CX069470 vs. ExPASy Swiss-Prot
Match: RL2_GEOTN (50S ribosomal protein L2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplB PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34 Identity = 72/145 (49.66%), Postives = 102/145 (70.34%), Query Frame = 2 Query: 371 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKP 802 M M+ + + ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAGTSA++L + + ++RL SG ++I +CRAT+G V N H + KAG++RWLG RP VRG MNPVDHPHGGGEG++ GR S +TPWGKP Sbjct: 114 MEIMSGPNADIKVGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKE-GKYVIIRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRARWLGIRPTVRGSVMNPVDHPHGGGEGKAPI----GRKSPMTPWGKP 253 The following BLAST results are available for this feature:
BLAST of CX069470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069470 ID=CX069470; Name=CX069470; organism=Citrus sinensis; type=EST; length=808bpback to top |