CX069469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURPS (50S ribosomal protein L2 OS=Burkholderia pseudomallei GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURP6 (50S ribosomal protein L2 OS=Burkholderia pseudomallei (strain 668) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURP1 (50S ribosomal protein L2 OS=Burkholderia pseudomallei (strain 1710b) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURP0 (50S ribosomal protein L2 OS=Burkholderia pseudomallei (strain 1106a) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURMS (50S ribosomal protein L2 OS=Burkholderia mallei (strain SAVP1) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURMA (50S ribosomal protein L2 OS=Burkholderia mallei GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURM9 (50S ribosomal protein L2 OS=Burkholderia mallei (strain NCTC 10229) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURM7 (50S ribosomal protein L2 OS=Burkholderia mallei (strain NCTC 10247) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GLYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BURM1 (50S ribosomal protein L2 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=rplB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 72/161 (44.72%), Postives = 102/161 (63.35%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 PK TV ++M + + + G+ +P+ + +GT IH IE+ PG+G ++ R+AGTSA +L + VRL SG + + CRATIG V N H +++ KAG +RW G RP VRGVAMNP+DHPHGGGEGR+ + GR ++PWG P K G++T Sbjct: 107 PKGVTVGQQLM---SGSEAPIRAGNTLPIRNIPVGTTIHCIEMLPGKGAQMARSAGTSAMLLARE-GVYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVAMNPIDHPHGGGEGRTAA----GRDPVSPWGTPTK-GFRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RK2_SINAL (50S ribosomal protein L2, chloroplastic OS=Sinapis alba GN=rpl2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.720e-31 Identity = 71/154 (46.10%), Postives = 96/154 (62.34%), Query Frame = -3 Query: 196 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKP 657 P+ + D I+ + ++ ++G+ +PL M +GT IHNIE+ G+GG+L RAAG AK++ + S L +LPSG +LI C AT+G V N K L +AG WLG+RPVVRGV MNPVDHPHGGGEGR+ + +TPWG P Sbjct: 105 PRGAIIGDTIV---SGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIG---RKKPVTPWGYP 251 The following BLAST results are available for this feature:
BLAST of CX069469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069469 ID=CX069469; Name=CX069469; organism=Citrus sinensis; type=EST; length=887bpback to top |