CX069436

Overview
NameCX069436
Unique NameCX069436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL7B_RAT (Actin-like protein 7B OS=Rattus norvegicus GN=Actl7b PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40
Identity = 87/199 (43.72%), Postives = 124/199 (62.31%), Query Frame = -1
Query:  305 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCD-VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 898
            R+D AG DLT+ LM++L E G+ F+      I+  +K+K  Y AL  E+E+        V+  YELPDG+VITIG ERFRC E+LF+PS++G    G+ E T   + +C     ++++  N++L GG TM  G  +R  +E+S L P      V A PERK SVW GGSILASL  FQQ+W++K E++E G + ++ KC
Sbjct:  223 RVDYAGCDLTNYLMQLLNEAGHKFSDD-HLHIIEHIKKKCCYAALLPEEEMSLGLDELHVD--YELPDGKVITIGQERFRCSEMLFKPSLVGSTQPGLPELTATCLDRCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSPT-VAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC 417          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL7A_RAT (Actin-like protein 7A OS=Rattus norvegicus GN=Actl7a PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40
Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = -1
Query:  302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898
            RLD AG DLT+ LM ++   G  F+      IV D+K K  ++ALD  +E +   +   +   Y LPDG+ I +G ERF C E+ F+PS+I     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE+S++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  246 RLDYAGSDLTNYLMNLMNNCGKHFSED-HLSIVEDIKTKCCFVALDPIEEKKIPPSEHEIH--YTLPDGKEIRLGQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPNDTP-QVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40
Identity = 85/199 (42.71%), Postives = 123/199 (61.81%), Query Frame = -1
Query:  302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898
            RLD AG DLT  L+ +L   G  FT   +  IV D+K+K  ++ALD  +E     +   +   Y LPDG+ I +  ERF C E+ F+PS+I     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE+S++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  241 RLDYAGSDLTAYLLGLLNSAGNEFTQD-QMGIVEDIKKKCCFVALDPTEEKRVPLSEHTIR--YVLPDGKEIQLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF 435          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL7B_BOVIN (Actin-like protein 7B OS=Bos taurus GN=ACTL7B PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39
Identity = 85/204 (41.67%), Postives = 125/204 (61.27%), Query Frame = -1
Query:  305 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKC-DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 913
            P    R D AG DLT+ L+++L E G+ FT      I+  +K+K  Y AL  E+EL        V+  YELPDG++I+IG ERF+C E+LF+P+++G    G+ E T   + +C +   ++++  N++L GG TM  G  +R  +E+S L P      V A PERK SVW GGSILASL  FQQ+W++K E++E G + ++ KC
Sbjct:  218 PGLTSRADYAGGDLTNYLLQLLNEAGHKFTDD-HLHIIEHIKKKCCYSALKPEEELSLCLEDLRVD--YELPDGKLISIGQERFQCAEMLFKPTLVGSNQPGLPELTAACLNRCQEAGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSPA-VAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGSAAIYSKC 417          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39
Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = -1
Query:  302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898
            RLD AG DLT  L+ +L   G  FT   +  IV D+K+K  ++ALD  +E +   +   +   Y LPDG+ I +  ERF C E+ F+PS+I     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE+S++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  241 RLDYAGSDLTAYLLGLLNSAGNEFTQD-QMGIVEDIKKKCCFVALDPIEEKKVPLSEHTIR--YVLPDGKEIQLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF 435          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP2_ARATH (Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.340e-39
Identity = 81/213 (38.03%), Postives = 133/213 (62.44%), Query Frame = -1
Query:  311 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI-----------SALAPSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWIAKSEYDESGPSIVHR 913
            PH   R+++AGR +T  L+ +L+ RGY+   TA+ E VR++KEKL YI+ DY++E +    ++ + K+Y LPDG+VI +G ERF+ PE LF P +I +E  G+ +  +  I + D+D R  LY +IVLSGGSTM+PG+  R+ KEI           +      +++++  PP RK+ V++GG++LA  +    + WI + +Y E G + +++
Sbjct:  173 PHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL7A_MOUSE (Actin-like protein 7A OS=Mus musculus GN=Actl7a PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39
Identity = 84/199 (42.21%), Postives = 122/199 (61.31%), Query Frame = -1
Query:  302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898
            RLD AG DLT  LM ++   G  F+      IV D+K +  ++ALD  +E +       +   Y LPDG+ I +G ERF C E+ F+PS+I     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE+S++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  246 RLDYAGSDLTTYLMNLMNNSGKHFSED-HLGIVEDIKTRCCFVALDPIEEKKIPAPEHEIH--YTLPDGKEIRLGQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPNDTP-QVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACTL9_HUMAN (Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 7.351e-38
Identity = 79/204 (38.73%), Postives = 122/204 (59.80%), Query Frame = -1
Query:  302 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI-GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 910
            HA  RLDLAG  LT  L ++L + G       + ++V ++K    Y+A D+++E   A+     +++ +LPDG+ +T+G E F+CPE+LF P  + G+   G+      S+ K  +++R DL  N++L GGS++F G   R   E+    P+   + V A P R +SVWIGGSILASL  FQ  W+ + +Y+E GP IV+RKC+
Sbjct:  216 HATERLDLAGNHLTAFLAEMLLQAGLPLGQQ-DLDLVENIKHHYCYVASDFQKE--QARPEQEYKRTLKLPDGRTVTLGKELFQCPELLFNPPEVPGLSPVGLSTMAKQSLRKLSLEMRADLAQNVLLCGGSSLFTGFEGRFRAELLRALPAETHVVVAAQPTRNFSVWIGGSILASLRAFQSCWVLREQYEEQGPYIVYRKCY 416          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACTL9_MOUSE (Actin-like protein 9 OS=Mus musculus GN=Actl9 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.793e-37
Identity = 80/205 (39.02%), Postives = 123/205 (60.00%), Query Frame = -1
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI-GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAI RLDLAG  LT  L ++L   G+S     + ++V ++K    Y+A D+++E   A+     ++S +LPDG+ +T+G E F+CPE+LF P  I G+   G+      S++K   ++R  +  N++L GGS++F G+  R   E+         + V+A P R  SVWIGGSILASL  FQ  W+ + +Y+E GP +V+RKC+
Sbjct:  214 PHAIQRLDLAGNHLTAFLAEMLLGSGFSLQQE-DLDLVENIKHHYCYLAPDFQKE--QARPDEECKQSLKLPDGRTVTLGKELFQCPELLFHPPEIPGLSPIGLPAMAEQSLLKVPQELRPHVARNVILCGGSSLFTGLEGRFRAELLHSLSPEDHVVVMAHPNRNLSVWIGGSILASLHAFQSCWVLREQYEERGPQVVYRKCY 415          
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACTL9_BOVIN (Actin-like protein 9 OS=Bos taurus GN=ACTL9 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.793e-37
Identity = 82/205 (40.00%), Postives = 120/205 (58.54%), Query Frame = -1
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI-GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHA  RLDLAG  LT  L ++L   G       + + V ++K +  Y+A D+ +E   A+      ++ +LPDG+ +T+G E F+CPE+LF P  I G+   G+      S+ K   ++R DL  N++L GGS++F G   R   E+    P    + V+A P R +SVWIGGSILASL TFQ  W+ + +Y+E GP IV+RKC+
Sbjct:  215 PHATQRLDLAGTHLTAFLAEMLLGSGLPLGQQ-DLDTVENIKHRYCYVAPDFLKE--QARPELECRQTLKLPDGRTVTLGKELFQCPELLFSPPEIPGLSPVGVPTMAQQSLSKVAAELRTDLAQNVLLCGGSSLFTGFQARFQTELLRNLPPEAHVVVMAQPTRNFSVWIGGSILASLRTFQSCWVLREQYEEQGPYIVYRKCY 416          
The following BLAST results are available for this feature:
BLAST of CX069436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ACL7B_RAT3.526e-4043.72Actin-like protein 7B OS=Rattus norvegicus GN=Actl... [more]
ACL7A_RAT3.526e-4042.71Actin-like protein 7A OS=Rattus norvegicus GN=Actl... [more]
ACL7A_MACFA7.854e-4042.71Actin-like protein 7A OS=Macaca fascicularis GN=AC... [more]
ACL7B_BOVIN1.026e-3941.67Actin-like protein 7B OS=Bos taurus GN=ACTL7B PE=2... [more]
ACL7A_HUMAN1.026e-3942.71Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE... [more]
ARP2_ARATH1.340e-3938.03Actin-related protein 2 OS=Arabidopsis thaliana GN... [more]
ACL7A_MOUSE2.285e-3942.21Actin-like protein 7A OS=Mus musculus GN=Actl7a PE... [more]
ACTL9_HUMAN7.351e-3838.73Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2... [more]
ACTL9_MOUSE2.793e-3739.02Actin-like protein 9 OS=Mus musculus GN=Actl9 PE=2... [more]
ACTL9_BOVIN2.793e-3740.00Actin-like protein 9 OS=Bos taurus GN=ACTL9 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10D10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10D10-G20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069436 ID=CX069436; Name=CX069436; organism=Citrus sinensis; type=EST; length=913bp
GGCGAATTGGGGTGACCGGGCCCCCCCNTTTTGGAATAAAAAGACAGAAT
TAACATTTCCCACAATATTGGGAGGGGTAACAATTTATCACTACTGAGAA
AAAGGGATAAAAATTTGGAAATAGTACAGCAACGATTATGTTCTTTCCAG
GTTGTTGTCCACACGTTGAAATGAAGAATGCCAAGAAAGGCAATAAAATG
AATGAAAATGCAAGCAGCATTTTGGTTTTAAAATAGAAAATGCAAGCAGC
ATTTTGGTTTTAAAATAGCACCATGCTCCAGTCCATATTTGCTCCTGATC
AGAAGCATTTCCTGTGCACTATTGAAGGGCCAGACTCATCATACTCAGAT
TTGGCAATCCACATTTGCTGGAAAGTGCTGAGGGATGCCAAAATGGATCC
TCCTATCCAGACACTATATTTCCTCTCGGGAGGAGCAACCACCTTAATCT
TCATGCTGCTTGGTGCTAATGCACTGATTTCTTTGCTCATTCTATCAGCA
ATACCAGGGAACATGGTGGAACCGCCACTAAGTACAATGTTCCCATACAG
ATCCTTCCTAATATCAACATCACATTTCATTATGGAGTTGTAAGTTGTTT
CATGAATACCAGCAGACTCCATACCGATCATTGATGGTTGGAAAAGGACT
TCTGGGCATCTAAAACGCTCAGCACCAATGGTGATCACCTGACCATCTGG
TAACTCATAGCTCTTTTCAACAGCAGAGCTGGTCTTGGCGGTTTCTAATT
CTTGTTCATAATCAAGGGCAATGTATGCCAATTTCTCCTTCATATCCCTC
ACAATTTCACGTTCGGCTGTGGTGGTAAATGAGTAGCCACGCTCAGTCAA
GATTTTCATCAAGGCATCAGTGAGATCACGACCGGCAAGGTCAAGACGCA
AGATTGCATGTGG
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