CX069436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP4_ARATH (Actin-related protein 4 OS=Arabidopsis thaliana GN=ARP4 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.811e-36 Identity = 94/246 (38.21%), Postives = 137/246 (55.69%), Query Frame = -1 Query: 305 AILRLDLAGRDLTDALMKILTERG------YSF-------------------TTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI----GMES--------AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 907 A++ L G LTD L+K L +G YSF TT + +R IV D+K+ + + + + S+ SYELPDGQ + IGA+RF+ P+V+F PS++ GME G+ SI KCDVDIR++LY +I+L+GG++ + +R+ K++ +P S ++KV+A ER++SVWIGGSILASL +FQQMW +KSEY+E G S + RKC Sbjct: 198 AVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVP---DTPYDDKSYSNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSJ (Actin-related protein 4 OS=Oryza sativa subsp. japonica GN=ARP4 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.874e-33 Identity = 89/239 (37.24%), Postives = 127/239 (53.14%), Query Frame = -1 Query: 305 LAGRDLTDALMKILTERG------YSFT-----------------TTAE-------REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI-----------GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 889 + G LTD +MK L +G YSF T E R I D+KE + + E+ A + SYELPDGQ I +GA+RF+ P++LF PS+ M G+ +S+ +CDVDIRK+L +I+LSGGS+ + +R+ KE+ + + ++KV+A ER++SVWIGGSILASL +FQQMW +K+EY+E G S + RKC Sbjct: 207 IGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGPGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGVSYIQRKC 442
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSI (Actin-related protein 4 OS=Oryza sativa subsp. indica GN=ARP4 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.874e-33 Identity = 89/239 (37.24%), Postives = 127/239 (53.14%), Query Frame = -1 Query: 305 LAGRDLTDALMKILTERG------YSFT-----------------TTAE-------REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI-----------GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 889 + G LTD +MK L +G YSF T E R I D+KE + + E+ A + SYELPDGQ I +GA+RF+ P++LF PS+ M G+ +S+ +CDVDIRK+L +I+LSGGS+ + +R+ KE+ + + ++KV+A ER++SVWIGGSILASL +FQQMW +K+EY+E G S + RKC Sbjct: 207 IGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGPGEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT---SYELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGVSYIQRKC 442
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.447e-33 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = -1 Query: 305 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 808 E+++D + + ++ D + + A V YE+P+G GAER R PE LF PS + G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E+S P SM++K++A ERK+S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 254 EVIQDFQASVLQVS-DSPYDEQVAAQMPTVH--YEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.447e-33 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = -1 Query: 305 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 808 E+++D + + ++ D + + A V YE+P+G GAER R PE LF PS + G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E+S P SM++K++A ERK+S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 254 EVIQDFQASVLQVS-DSPYDEQVAAQMPTVH--YEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.447e-33 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = -1 Query: 305 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 808 E+++D + + ++ D + + A V YE+P+G GAER R PE LF PS + G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E+S P SM++K++A ERK+S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 254 EVIQDFQASVLQVS-DSPYDEQVAAQMPTVH--YEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.447e-33 Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = -1 Query: 305 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 808 E+++D + + ++ D + + A V YE+P+G GAER R PE LF PS + G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E+S P SM++K++A ERK+S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 254 EVIQDFQASVLQVS-DSPYDEQVAAQMPTVH--YEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACTL9_RAT (Actin-like protein 9 OS=Rattus norvegicus GN=Actl9 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.299e-33 Identity = 75/204 (36.76%), Postives = 114/204 (55.88%), Query Frame = -1 Query: 305 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQP-SMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 913 P I R+DLAG LT L + + ++ + + + ++K++ Y+ALD+++E + + +LPDGQ+IT+G E F+CPE+LF P G S G+ +S+ ++R D+ N++L GGS++F G R E+ + VVA R SVWIGGSILASL FQ W+ + +Y+E GP IV RKC Sbjct: 210 PSGIQRMDLAGHYLTKFLAEKILRSSFA-VKKEDMDTMENIKQQYCYVALDFQKE--QGRPDEKFRRCLKLPDGQMITVGKELFQCPELLFHPPDTSGPSSLGLPSMVEHSLSTVPQELRADMEQNVLLCGGSSLFTGFEGRFKTELLRRLGPEAHVVVVAQANRNLSVWIGGSILASLCAFQTRWVLREQYEEHGPDIVLRKC 410
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = -1 Query: 305 YELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 709 YE P+G GAER + PE LF PS + G G+ S+ CD+DIR LYG+++++GG+T+ DR+++E+S P SM++K++A ER++S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 287 YEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6A_MACFA (Actin-like protein 6A OS=Macaca fascicularis GN=ACTL6A PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = -1 Query: 305 YELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 709 YE P+G GAER + PE LF PS + G G+ S+ CD+DIR LYG+++++GG+T+ DR+++E+S P SM++K++A ER++S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 287 YEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428 The following BLAST results are available for this feature:
BLAST of CX069436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069436 ID=CX069436; Name=CX069436; organism=Citrus sinensis; type=EST; length=913bpback to top |