CX069436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.878e-25 Identity = 77/255 (30.20%), Postives = 115/255 (45.10%), Query Frame = -1 Query: 302 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS---AVEKSYELPDGQVITIGA-------------------------------------------------ERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 910 +A+ R+DL G+ LT+ L ++++ R S E ++ D KEKL +++LD +L A+ SS SY LPDG G ERF PE+LF P +GM AG+ E +I C ++ L+ I+L+GGST+FP +R+ KE+ L P ++K++A + W GGS+LA F+ M I KSEY+E G R+ F Sbjct: 176 YAVRRMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.878e-25 Identity = 77/255 (30.20%), Postives = 115/255 (45.10%), Query Frame = -1 Query: 302 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS---AVEKSYELPDGQVITIGA-------------------------------------------------ERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 910 +A+ R+DL G+ LT+ L ++++ R S E ++ D KEKL +++LD +L A+ SS SY LPDG G ERF PE+LF P +GM AG+ E +I C ++ L+ I+L+GGST+FP +R+ KE+ L P ++K++A + W GGS+LA F+ M I KSEY+E G R+ F Sbjct: 176 YAVRRMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSNDNPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELSQNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.453e-25 Identity = 72/220 (32.73%), Postives = 112/220 (50.91%), Query Frame = -1 Query: 320 ILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV--------ITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSI 904 I + +AGRD+T + +L +R ++ E+ + +KEK Y+ D +E T +A K DG + +G ERF PE+ F P E + I +T I +C +D+R+ LY NIVLSGGSTMF A ++ +++ L+ P + ++V++ ++Y+VW GGS+LAS S F Q+ K+EY E GPSI Sbjct: 197 IKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAA--KWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.184e-25 Identity = 65/227 (28.63%), Postives = 114/227 (50.22%), Query Frame = -1 Query: 308 AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS---SAVEKSYELPD------------------------GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRK 907 AI+R+++ G+ LT+ L +I++ R E ++ +KE + Y++ D+ ++++ AK + V Y LPD Q++ + ERF PE+LF PS IG++ GI E SI +++ + NIVL+GG+++FPG DR+ E+ L P+ + VV P W GG +++ F+ M + + +Y+E+G S+ K Sbjct: 169 AIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGFCKPREEMVLSGKYKSGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVVLPENPITYAWEGGKLISENDDFEDMVVTREDYEENGHSVCEEK 393
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.184e-25 Identity = 66/227 (29.07%), Postives = 114/227 (50.22%), Query Frame = -1 Query: 308 AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS---SAVEKSYELPD------------------------GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRK 907 AI+R+++ G+ LT+ L +I++ R E ++ +KE + Y++ D+ +++E AK + V Y LPD Q++ + ERF PE+LF PS IG++ GI E +SI +++ + NIVL+GG+T+FPG DR+ E+ L P+ + VV P W GG +++ F+ + + + +Y+E G +I K Sbjct: 169 AIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKDMEIAKLKGEENTVMVDYVLPDFSTIKKGFCKPREEMVLSGKYKTGEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVDSIQNLPEEMQPHFFKNIVLTGGNTLFPGFRDRVYSEVRCLTPTDYDVSVVLPENPITYSWEGGKLISENDDFEDLVVTREDYEEHGHNICEEK 393
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.076e-24 Identity = 64/227 (28.19%), Postives = 114/227 (50.22%), Query Frame = -1 Query: 308 AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS---SAVEKSYELPD------------------------GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRK 907 AI+R+++ G+ LT+ L +I++ R E ++ +KE + Y++ D+ ++++ AK + V Y LPD Q++ + ERF PE+LF PS IG++ GI E SI +++ + NIVL+GG+++FPG +R+ E+ L P+ + VV P W GG +++ F+ M + + +Y+E+G S+ K Sbjct: 169 AIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMIDYVLPDFSTIKKGFCKPREEMVLSGKYKSGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRCLTPTDYDVSVVLPENPITYSWEGGKLISENDDFEDMVVTREDYEENGHSVCEEK 393
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.031e-23 Identity = 62/211 (29.38%), Postives = 107/211 (50.71%), Query Frame = -1 Query: 329 ILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG-------------------QVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESG 904 I R+++ G+ +T+ L + ++ R Y+ E I+ +KEK+ +++ D++++L+ AK + +++ Y LPD Q + +G ERF PE+LF PS+I ++ +G+ ET SI + R L NIV+ GG PG R+ K++ L PS +K + ++ GG +L F + + K EYDE G Sbjct: 159 IRRVNVGGKTMTNLLKETVSFRHYNMMD--ETYIINRVKEKVCFVSQDFDKDLDLAKKTKSLQVEYALPDYKTTKLGYVVDRKQHDISELQTLKLGNERFTMPEILFDPSIIDLQQSGLCETIAESIQASPKEFRSLLCSNIVIVGGCAKLPGFQSRLEKDLRPLIPSEYHMKTRLDDKPDFTTLQGGKVLVDQPGFSNLCVTKQEYDEYG 367
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23 Identity = 67/221 (30.32%), Postives = 109/221 (49.32%), Query Frame = -1 Query: 320 AILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETA--------KTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMES-AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMK----------------IKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSI 907 +I + LAGRD+T+ ++++L ER E+ + +KE +Y+ D +E + KT +E + P + +G ERF PE+ F P + + + + +I C +D R+ LY NIVLSGGSTMF R+ ++I +K +KV++ ++++VW GGS+LAS F ++ K +YDE GPSI Sbjct: 197 SIKHIPLAGRDITNFVLQLLRERNEKIPPAETLEVAKRIKETFSYVCPDIVKEFKKYDTEPDKWFKTYEGIESVGKKPYN--VDVGYERFLGPEIFFNPEIFSSDFLTPLPKVVDETIQSCPIDTRRGLYKNIVLSGGSTMFKDFGKRLQRDIKRAVDYRIKRSEELSQGRIKSKAVDVKVISHHMQRFAVWFGGSMLASTPEFYKVCHTKQQYDEVGPSI 415
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP3_YEAST (Actin-related protein 3 OS=Saccharomyces cerevisiae GN=ARP3 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.680e-23 Identity = 68/219 (31.05%), Postives = 115/219 (52.51%), Query Frame = -1 Query: 317 AILRLDLAGRDLTDALMKILTERGYSFTT--TAEREIVRDMKEKLAYIALDYEQEL-----ETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYN-SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIV 907 AI + +AGRD+T + +L ERG + T+ TAE+ +K++ Y+ D +E + +K + V ++ E +V+ IG ERF PE+ F P + + T + +I C +D+RK LY NIVLSGGSTMF R+ +++ ++ + + + V++ +++ +VW GGS+LA + F+ K +Y+E GP IV Sbjct: 227 AIKNIPIAGRDITLFIQSLLRERGEADTSLRTAEK-----IKQEYCYVCPDIVKEFNKFDKDPSKFAQFVVENQEKTRRKVVDIGYERFLAPEIFFNPEIASSDFLTPLPTVVDQTIQACPIDVRKGLYNNIVLSGGSTMFKDFGRRLQRDLKSIVNNRIAQSELLSGTKSTGVDVSVISHRKQRNAVWFGGSLLAQTAEFKGYCHTKKDYEEYGPEIV 440
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 69/220 (31.36%), Postives = 103/220 (46.82%), Query Frame = -1 Query: 320 ILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS--------SAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI----------------SALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSI 904 I + +AGR++T + +L ER E + +KEK YI D +E T S V + P + +G ERF PE+ F P + + + E N I C +D+R+ LY NIVLSGGSTMF R+ ++I + P + ++V+ ++Y+VW GGS+LAS F Q+ K+ Y+E GPSI Sbjct: 190 IKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVTKAPFN--VDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSI 407 The following BLAST results are available for this feature:
BLAST of CX069436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069436 ID=CX069436; Name=CX069436; organism=Citrus sinensis; type=EST; length=913bpback to top |