DR403814

Overview
NameDR403814
Unique NameDR403814
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: HTOA_HAEIN (Probable periplasmic serine protease do/hhoA-like OS=Haemophilus influenzae GN=HI1259 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.470e-18
Identity = 59/162 (36.42%), Postives = 87/162 (53.70%), Query Frame = 2
Query:  122 RGSGAGFLWDQD-GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREI--PGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFI--TSGAFSGIGFALPN 592
            RG G+G + +   G+++TN HVI GA  + V   D   F A++VG D+ +D+A++ ++ P++ L  I    S  LRVG    AIG+P G   T T+G++SAL R         +  IQ DA+VN               IG+NT I   SG  +GI FA+P+
Sbjct:  100 RGLGSGVIINASKGYVLTNNHVIDGADKITVQLQDGREFKAKLVGKDEQSDIALVQLEKPSN-LTEIKFADSDKLRVGDFTVAIGNPFGLGQTVTSGIVSALGRSTGSDSGTYENYIQTDAAVNRGNSGGALVNLNGELIGINTAIISPSGGNAGIAFAIPS 260          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGQ_ECOLI (Protease degQ OS=Escherichia coli (strain K12) GN=degQ PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 2
Query:   98 DQSETEFLRGSGAGFLWDQD-GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDREIPGRLIQGV---IQIDASVNXXXXXXXXXXXXXXXIGVNTFITS--GAFSGIGFALPN 592
            DQ    F  G G+G + +   G+++TN HVI  A  + +  +D   F A+++G D  +D+A+L I  P+ +L  I +  S  LRVG    A+G+P G   T T+G++SAL R   G  ++G+   IQ DAS+N               IG+NT I +  G   GIGFA+P+
Sbjct:   82 DQPAQPF-EGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRS--GLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPS 248          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_BUCAI (Probable serine protease do-like OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=degP PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 59/169 (34.91%), Postives = 90/169 (53.25%), Query Frame = 2
Query:   95 EDQSETEFLRGSGAGFLWDQD-GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDRE-IPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITS--GAFSGIGFALP 589
            +   + E  R  G+G + + D G+ VTN HV+  A+ ++V  SD   + A+V+G D  +D+A++ +   N+ L  I +  S +LRVG    AIG+P G   T T+G+ISAL R  +     +  IQ DA++N               IG+NT I +  G   GIGFA+P
Sbjct:  104 DSDDKKEKFRALGSGVIINADKGYAVTNNHVVENANKIQVQLSDGRRYEARVIGKDSRSDIALIQLKNANN-LSEIKIADSDNLRVGDYTVAIGNPYGLGETVTSGIISALGRSGLNIEHYENFIQTDAAINRGNSGGALVNLKGELIGINTAILAPDGGNIGIGFAIP 271          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: YYXA_BACSU (Uncharacterized serine protease yyxA OS=Bacillus subtilis GN=yyxA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 59/170 (34.71%), Postives = 89/170 (52.35%), Query Frame = 2
Query:  125 GSGAGFLWDQDGH---IVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSF--TCTTGVISALDREIP--------GRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTF-ITSGAFSGIGFALPN 592
            GSG+G ++ ++ H   +VTN+HVI GAS +++S  D S   A +VG DQ+ DLAVL + +   +      G S  ++ G+ + AIG+PLG  F  + T GVIS  +R IP              V+Q DA++N               IG+N+  I   A  GIG ++P+
Sbjct:  108 GSGSGVIYKKNDHSAYVVTNHHVIEGASQIEISLKDGSRVSADLVGSDQLMDLAVLRVKSDKIK-AVADFGNSDKVKSGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALLNMDGKVIGINSMKIAESAVEGIGLSIPS 276          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGS_ECOLI (Protease degS OS=Escherichia coli (strain K12) GN=degS PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15
Identity = 62/184 (33.70%), Postives = 87/184 (47.28%), Query Frame = 2
Query:   62 SVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDR---EIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITSGAF-----SGIGFALP 589
            +VV + N G+  +      +R  G+G + DQ G+I+TN HVI  A  + V+  D   F A +VG D + DLAVL I+A    L  I +       +G  + AIG+P     T T G+ISA  R      GR  Q  +Q DAS+N               +G+NT     +       GIGFA+P
Sbjct:   57 AVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR--QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIP 237          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGS_ECO57 (Protease degS OS=Escherichia coli O157:H7 GN=degS PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15
Identity = 62/184 (33.70%), Postives = 87/184 (47.28%), Query Frame = 2
Query:   62 SVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDR---EIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITSGAF-----SGIGFALP 589
            +VV + N G+  +      +R  G+G + DQ G+I+TN HVI  A  + V+  D   F A +VG D + DLAVL I+A    L  I +       +G  + AIG+P     T T G+ISA  R      GR  Q  +Q DAS+N               +G+NT     +       GIGFA+P
Sbjct:   57 AVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR--QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIP 237          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: HTRAL_STAHJ (Serine protease htrA-like OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1936 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 55/167 (32.93%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  131 GAGFLW---DQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSF--TCTTGVISALDREIPGRLIQ--------GVIQIDASVNXXXXXXXXXXXXXXXIG-VNTFITSGAFSGIGFALP 589
            G+G ++   D    I+TN H++     V +++ D  T  A VVG D  +D+AVL     N  ++PI +G S  L++G+ I  +G+PLG  F  T T G+IS L+R +P    +           QIDASVN               +G V+  I      G+GFA+P
Sbjct:  355 GSGVVYKAVDDTFFILTNTHIVGSNKRVNITYDDDKTATATVVGRDMWSDIAVLKATIKNKNMQPIKIGHSKHLKLGESILVVGNPLGNDFKNTVTKGIISGLNRAVPVDFDKDNKNDEWVNTFQIDASVNPGNSGGAVVNRVGELVGLVSLKINMPNIEGMGFAIP 521          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: HTRA_LACHE (Serine protease do-like htrA OS=Lactobacillus helveticus GN=htrA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 60/169 (35.50%), Postives = 84/169 (49.70%), Query Frame = 2
Query:  116 FLRGSGAGFLWDQD-GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLG--WSFTCTTGVISALDREI--PGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTF-----ITSGAFSGIGFALPN 592
            +  GSG  ++     G+IVTN HVI G+  V+V  ++  T  A+VVG D   DLAVL IDA  +  +    G S  L  GQ + A+G PLG  ++ T T G+ISA  R I       Q VIQ DA++N               IG+N+          +  G+ FA+P+
Sbjct:  128 YSEGSGVVYMKSNGKGYIVTNNHVISGSDAVQVLLANGKTVNAKVVGKDSTTDLAVLSIDA-KYVTQTAQFGDSKHLEAGQTVIAVGSPLGSEYASTVTQGIISAPARTISTSSGNQQTVIQTDAAINPGNSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMAFAIPS 295          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: HTRA2_BOVIN (Serine protease HTRA2, mitochondrial OS=Bos taurus GN=HTRA2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 63/189 (33.33%), Postives = 92/189 (48.68%), Query Frame = 2
Query:   41 IFEENISSVVWIGNLGIREDQSETEFLRGSGAGFLWDQDGHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVIS-----ALDREIPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITSGAFSGIGFALPN 592
            + E+   +VV+I  LG R   S  E    +G+GF+   DG IVTN HV+     V+V      T+ A V   D V D+A L I      L  + +G SAD+R G+ + A+G P     T T+G++S     A D  +P   ++  IQ DA+++               IGVNT   +   SGI FA+P+
Sbjct:  153 VVEKTAPAVVYIEILG-RHPFSGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLPSGDTYEAVVTAVDPVADIATLRIQT-KEPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPAKDLGLPQTNVE-YIQTDAAIDFGNSGGPLVNLDGEVIGVNTMKVT---SGISFAIPS 335          
BLAST of DR403814 vs. ExPASy Swiss-Prot
Match: DEGP_BUCAP (Probable serine protease do-like OS=Buchnera aphidicola subsp. Schizaphis graminum GN=degP PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  131 GAGFLWDQD-GHIVTNYHVICGASTVKVSFSDQSTFYAQVVGHDQVNDLAVLHIDAPNHELRPIHVGVSADLRVGQKIYAIGHPLGWSFTCTTGVISALDRE-IPGRLIQGVIQIDASVNXXXXXXXXXXXXXXXIGVNTFITS--GAFSGIGFALP 589
            G+G + + D  + VTN HV+  A+ ++V  SD   + A ++G D  +D+A++ +    + L  I +  S  LRVG    AIG+P G   T T+G+ISAL R  +     +  IQ DA++N               IG+NT I +  G   GIGFA+P
Sbjct:  116 GSGVIINADKAYAVTNNHVVENANKIQVQLSDGRRYEASIIGKDSRSDIALIQLKNAKN-LSAIKIADSDTLRVGDYTVAIGNPYGLGETVTSGIISALGRSGLNIEHYENFIQTDAAINRGNSGGALVNLKGELIGINTAILAPDGGNIGIGFAIP 271          
The following BLAST results are available for this feature:
BLAST of DR403814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
HTOA_HAEIN9.470e-1836.42Probable periplasmic serine protease do/hhoA-like ... [more]
DEGQ_ECOLI2.755e-1735.67Protease degQ OS=Escherichia coli (strain K12) GN=... [more]
DEGP_BUCAI2.755e-1734.91Probable serine protease do-like OS=Buchnera aphid... [more]
YYXA_BACSU3.046e-1634.71Uncharacterized serine protease yyxA OS=Bacillus s... [more]
DEGS_ECOLI1.158e-1533.70Protease degS OS=Escherichia coli (strain K12) GN=... [more]
DEGS_ECO571.158e-1533.70Protease degS OS=Escherichia coli O157:H7 GN=degS ... [more]
HTRAL_STAHJ1.512e-1532.93Serine protease htrA-like OS=Staphylococcus haemol... [more]
HTRA_LACHE7.503e-1535.50Serine protease do-like htrA OS=Lactobacillus helv... [more]
HTRA2_BOVIN7.503e-1533.33Serine protease HTRA2, mitochondrial OS=Bos taurus... [more]
DEGP_BUCAP1.280e-1434.39Probable serine protease do-like OS=Buchnera aphid... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246F16 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246F16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403814 ID=DR403814; Name=DR403814; organism=Citrus sinensis; type=EST; length=618bp
GGGGTGTAAGCTTCAGATGGATGAACTTGAAACGATCCGTATTTTTGAAG
AAAACATATCTTCAGTTGTTTGGATCGGCAACCTTGGTATCCGTGAGGAT
CAAAGTGAGACAGAGTTCCTTCGGGGAAGCGGGGCGGGTTTTTTATGGGA
TCAAGATGGTCACATTGTCACTAACTATCATGTGATTTGTGGCGCTTCTA
CAGTCAAGGTCAGTTTTTCTGACCAATCAACTTTCTATGCACAAGTTGTT
GGTCATGACCAAGTCAATGATTTGGCAGTGTTGCACATTGATGCTCCAAA
TCACGAATTAAGACCTATACATGTTGGTGTCTCTGCTGACTTGCGTGTTG
GTCAAAAAATCTATGCAATTGGCCACCCTCTTGGATGGTCATTTACCTGT
ACAACTGGCGTGATCAGTGCACTTGATAGGGAAATCCCTGGCCGTTTAAT
TCAAGGTGTTATACAGATTGATGCTTCCGTTAATCTTGGTAACAGTGGAG
GGCCGCTTCTGGATAGTTCAGGAAGCCTGATTGGAGTAAATACATTTATT
ACCTCTGGTGCATTCAGTGGTATTGGATTTGCCTTACCCAATTGACACGG
TACGTGGCATTGTTGACC
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