DR403807

Overview
NameDR403807
Unique NameDR403807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34
Identity = 78/173 (45.09%), Postives = 106/173 (61.27%), Query Frame = 3
Query:  177 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            KTKIVCT+GPAS S  +LE+L+ AGMNVAR NFSHG H   +  ++++R        +  ++LDTKGPEIRT  + +GK ++L  GQ+I +S     +GN ++ ++SY KL  DV  G+ IL  DG I L V   D   G +     N+  L   K VN+PGV V LP +TEK
Sbjct:    3 KTKIVCTIGPASESPELLEQLIEAGMNVARLNFSHGNHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGK-LELVTGQKIDISMT-QVEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKDVARGLIHTLIINSGSLSNNKGVNIPGVSVQLPGMTEK 173          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 84/182 (46.15%), Postives = 115/182 (63.19%), Query Frame = 3
Query:  180 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            T I+CT+GPASRSV ML++++++GMNVAR NFSHGTHEY  ET+ N+RAA     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V   +  +  +    EN   LG +K VNLPG  VDLP ++EK
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK--EKGADYLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEK 224          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 139.428 bits (350), Expect = 1.720e-32
Identity = 83/182 (45.60%), Postives = 114/182 (62.64%), Query Frame = 3
Query:  180 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            T I+CT+GPASRSV ML++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V   +  +  +    EN   LG +K VNLPG  VDLP ++EK
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK--EKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEK 224          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 3
Query:  171 LPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            + KTKIV TLGPAS  +  + KL  AG NV RFNFSHG HE     +N +R     T  L  + LDTKG EIRT   + GK   +  G EI VS D    GN++MI ++Y  L  D   G T+L  DG + LT+ + D +   + C  +NT ++G +K VN PGV + LP +TEK
Sbjct:    1 MKKTKIVSTLGPASDDIETITKLAEAGANVFRFNFSHGNHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGK-FTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLIDDGAVGLTIKAKDEEKRELVCEAQNTGVIGSKKGVNAPGVEIRLPGITEK 174          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 86/206 (41.75%), Postives = 125/206 (60.68%), Query Frame = 3
Query:  114 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            AMA+  +E + R D+ +     + T I+CT+GPASRSV +L++++++GMNVAR NFSHGTHEY  ET+ N+RAA  +           AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ +   DG I+L V   +  +  +    EN   LG +K VNLPG  VDLP ++EK
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVK--EKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEK 224          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 82/182 (45.05%), Postives = 111/182 (60.99%), Query Frame = 3
Query:  180 TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V  G+ +   DG I+L V    P    +    EN   LG +K VNLPG  VDLP ++EK
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGP--DFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEK 224          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_LEIME (Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 74/173 (42.77%), Postives = 109/173 (63.01%), Query Frame = 3
Query:  183 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            +I+CT+GP+++SV  L+ L+++GM+VAR NFSHG+HEY Q T+NN+R A     +  A+ LDTKGPEIRTG    G  + ++ G    V+TD  F  KG ++   + Y+ L   V+PGN I   DG + L V S + +  T+ C   N+  + +R+ VNLPG  VDLP ++ K
Sbjct:   23 RIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPEIRTGQFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQ-TLECTVTNSHTISDRRGVNLPGCDVDLPAVSAK 193          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32
Identity = 88/206 (42.72%), Postives = 124/206 (60.19%), Query Frame = 3
Query:  114 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            AMA+  +E + R D+ +     + T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V      +  +    EN   LG +K VNLPG  VDLP ++EK
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK--QKGADFLLTEVENGGSLGSKKGVNLPGAAVDLPAVSEK 224          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 137.117 bits (344), Expect = 8.535e-32
Identity = 88/206 (42.72%), Postives = 124/206 (60.19%), Query Frame = 3
Query:  114 AMANIDIEGLLR-DVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMH---NTQIL---CAVMLDTKGPEIRTGFLKDG--KPIQLKEGQ--EITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            AMA+  +E + R D+ +     + T I+CT+GPASRSV  L++++++GMNVAR NFSHGTHEY  ET+ N+R A     +  IL    AV LDTKGPEIRTG +K      ++LK+G   +IT+   Y  K +E ++ + YK +   V+ G+ I   DG I+L V      +  +    EN   LG +K VNLPG  VDLP ++EK
Sbjct:   21 AMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK--QKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEK 224          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYR_HUMAN (Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.115e-31
Identity = 84/206 (40.78%), Postives = 124/206 (60.19%), Query Frame = 3
Query:  114 AMANIDIEGL-LRDVPNDKRLPK-TKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHN------TQILCAVMLDTKGPEIRTGFLKDG--KPIQLKEGQEITVSTDYDF--KGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            AMA+  +E L L D+ ++    + T I+ T+GPASRSV  L+++++AGMN+AR NFSHG+HEY  E++ N+R A+ +      +    A+ LDTKGPEIRTG L+ G    ++L +G ++ V+ D  F  +GN   + + Y  +   V  G  I   DG I+L V    P+   +  + EN  +LG RK VNLPG  VDLP L+E+
Sbjct:   64 AMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQGGPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQKIGPEG--LVTQVENGGVLGSRKGVNLPGAQVDLPGLSEQ 267          
The following BLAST results are available for this feature:
BLAST of DR403807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
KPYK_BACPY9.119e-3445.09Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYM_RAT4.526e-3346.15Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYM_MOUSE1.720e-3245.60Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_LACDE2.246e-3244.00Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYM_FELCA2.934e-3241.75Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]
KPYM_RABIT5.004e-3245.05Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_LEIME5.004e-3242.77Pyruvate kinase OS=Leishmania mexicana GN=PYK PE=1... [more]
KPYM_PONAB6.535e-3242.72Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYM_HUMAN8.535e-3242.72Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYR_HUMAN1.115e-3140.78Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PK... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246F09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403807 ID=DR403807; Name=DR403807; organism=Citrus sinensis; type=EST; length=697bp
GGGGACTCTGGTATTTAGCGCCGTGGAGAAGCAAAGGTGTGCCAGCGAAC
AGCTGTTCTGTTGGGGTAACTGACTGATATATTCGTTATTGTGAACTAGA
CTTGATAAGGTAAGCTATGGCGAACATAGATATAGAGGGACTCTTGAGAG
ATGTGCCAAATGATAAGCGGTTGCCGAAGACGAAGATTGTGTGTACTTTA
GGTCCTGCTTCCCGTTCTGTGCCGATGCTTGAGAAGCTTCTGAGGGCTGG
AATGAATGTTGCTCGTTTCAATTTCTCTCATGGTACGCACGAGTATCAGC
AGGAGACTTTGAACAATCTCAGAGCTGCCATGCACAACACCCAGATCCTC
TGTGCTGTCATGCTCGATACCAAGGGACCCGAGATTCGAACTGGTTTCCT
TAAGGATGGAAAACCCATACAACTTAAAGAAGGTCAGGAAATTACTGTAT
CTACTGATTATGACTTCAAGGGAAATGAAGAAATGATCACCATGAGCTAC
AAGAAGCTGCCTGTGGATGTGAAGCCTGGAAATACCATCTTGTGTGCAGA
TGGCACCATAACCCTGACTGTCTTGTCTTGTGATCCAAAATCTGGAACTG
TCAGGTGCCGTTGTGAGAACACTGCAATGCTAGGCGAGAGAAAGAATGTC
AATCTTCCTGGTGTTGTGGTGGATCTGCCCACACTGACTGAAAAGGA
back to top