DR403807

Overview
NameDR403807
Unique NameDR403807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_MYCPN (Pyruvate kinase OS=Mycoplasma pneumoniae GN=pyk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15
Identity = 56/199 (28.14%), Postives = 90/199 (45.23%), Query Frame = 3
Query:  171 LPKTKIVCTLGPA--------------------SRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMS----YKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            L +TKI+ T GPA                    + +   +E +++ G+ V R NFSHG HE Q   +  +R       +  ++MLDT GPEIR  F    + +++ +  E+ ++T           ++S       +  DVK G  IL  DG ++L V   D K+  V C  +N   +  +K +NLP     +P L+ K
Sbjct:    5 LKRTKIIATCGPALTKKLWTLAMLDDPAYAAMKAEAYANIENIIKNGVTVIRLNFSHGNHEEQAVRIKIVRDVAKKLNLPVSIMLDTNGPEIRV-FETAPEGLKILKDSEVVINTTTKEVAKNNQFSVSDASGTYNMVNDVKVGQKILVDDGKLSLVVKRIDTKNNQVICVAQNDHTIFTKKRLNLPNADYSIPFLSAK 202          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_THEAC (Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0896 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 50/173 (28.90%), Postives = 91/173 (52.60%), Query Frame = 3
Query:  177 KTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            KTKIV T+GPAS S  ++++++  G+++ R N +H   +   +    +R+   +      +M+D KGPE+RTG    G  +++  G++  +  D         I ++   +   V+ G+ IL +DG ++  V S DP       R  N  +L +R  VN+PG  ++L T+T++
Sbjct:    2 KTKIVATIGPASSSPEIMKQMIDNGLSLVRINSAHADIKDVSKITQMVRSINRDV----GIMIDLKGPELRTGEFAGG-TLKISSGKDYVMGKD---------IVLNNMNVLSAVQVGDRILMSDGEVSFEVESTDP----FTIRALNDGVLRDRSRVNIPGRFIELGTITDR 156          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_AERPE (Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 56/171 (32.75%), Postives = 87/171 (50.88%), Query Frame = 3
Query:  183 KIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            KIV T+GP+S S  +L ++L  G++VAR N SHG  E     L +LR A         V +D +GP +RTG   + +P++L++G  +T+         E  + +  ++    +  G+ +L  DG I L V S +     V+ R     +LG RK V + G   DLP L+ K
Sbjct:    6 KIVATVGPSSSSASILAQMLSLGVDVARINASHGGVEQWNSMLESLRRAEEAVGKRVGVAVDLEGPRVRTG---NSEPVKLEKGDLVTLGF------MEGDVPVDARQFFETIDEGDIVLLDDGKIILQVESVE--GFRVKARVLEGGVLGPRKGVVVRGKEPDLPPLSAK 165          
BLAST of DR403807 vs. ExPASy Swiss-Prot
Match: KPYK_BUCBP (Pyruvate kinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=pykA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 53/177 (29.94%), Postives = 86/177 (48.59%), Query Frame = 3
Query:  165 KRLPKTKIVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYQQETLNNLRAAMHNTQILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEITVSTDYDFKGNEEMITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEK 695
            +R  +TKIV TLGP++ +  +LE ++++G+NV R NFSHGT E        + +         A++ D +GP+IR    +D K         I  +   +  G  E + + YK LP DVK  + +L  DG I L V++   +   +  +     +L   K +N  G  +    LT+K
Sbjct:    3 RRFRRTKIVATLGPSTDNHIILENMIKSGVNVFRLNFSHGTREEHIYRAKLVTSIAKRLNCHIALLGDLQGPKIRICKFQDKKVFLKVNNYFILDANLNENLGTSERVGIDYKNLPKDVKKCDILLLDDGKIQLKVINIVDQE--IFTKIIIGGVLSNNKGINKLGGGLSARILTKK 177          
The following BLAST results are available for this feature:
BLAST of DR403807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
KPYK_MYCPN1.463e-1528.14Pyruvate kinase OS=Mycoplasma pneumoniae GN=pyk PE... [more]
KPYK_THEAC1.617e-1428.90Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0... [more]
KPYK_AERPE2.112e-1432.75Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV... [more]
KPYK_BUCBP1.788e-1329.94Pyruvate kinase OS=Buchnera aphidicola subsp. Baiz... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246F09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403807 ID=DR403807; Name=DR403807; organism=Citrus sinensis; type=EST; length=697bp
GGGGACTCTGGTATTTAGCGCCGTGGAGAAGCAAAGGTGTGCCAGCGAAC
AGCTGTTCTGTTGGGGTAACTGACTGATATATTCGTTATTGTGAACTAGA
CTTGATAAGGTAAGCTATGGCGAACATAGATATAGAGGGACTCTTGAGAG
ATGTGCCAAATGATAAGCGGTTGCCGAAGACGAAGATTGTGTGTACTTTA
GGTCCTGCTTCCCGTTCTGTGCCGATGCTTGAGAAGCTTCTGAGGGCTGG
AATGAATGTTGCTCGTTTCAATTTCTCTCATGGTACGCACGAGTATCAGC
AGGAGACTTTGAACAATCTCAGAGCTGCCATGCACAACACCCAGATCCTC
TGTGCTGTCATGCTCGATACCAAGGGACCCGAGATTCGAACTGGTTTCCT
TAAGGATGGAAAACCCATACAACTTAAAGAAGGTCAGGAAATTACTGTAT
CTACTGATTATGACTTCAAGGGAAATGAAGAAATGATCACCATGAGCTAC
AAGAAGCTGCCTGTGGATGTGAAGCCTGGAAATACCATCTTGTGTGCAGA
TGGCACCATAACCCTGACTGTCTTGTCTTGTGATCCAAAATCTGGAACTG
TCAGGTGCCGTTGTGAGAACACTGCAATGCTAGGCGAGAGAAAGAATGTC
AATCTTCCTGGTGTTGTGGTGGATCTGCCCACACTGACTGAAAAGGA
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