CX069374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHM4B_MOUSE (Charged multivesicular body protein 4b OS=Mus musculus GN=Chmp4b PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 85 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I +Q E ++I A+S P+G Sbjct: 60 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAEEISTAISKPVG 154
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHM4B_HUMAN (Charged multivesicular body protein 4b OS=Homo sapiens GN=CHMP4B PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.395e-12 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 85 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +ID VD+ M +I +Q E ++I A+S P+G Sbjct: 60 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAHDNMDIDKVDELMQDIADQQELAEEISTAISKPVG 154
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHM4B_XENTR (Charged multivesicular body protein 4b OS=Xenopus tropicalis GN=chmp4b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.659e-12 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 85 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +I+ VD+ M +I +Q E ++I +A+S P+G Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQEISDAISKPVG 152
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHM4B_XENLA (Charged multivesicular body protein 4b OS=Xenopus laevis GN=chmp4b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.659e-12 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 85 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 KNKRAA+Q LKRK+ YE+Q+ Q+ I Q LE A TE + + A MKA +I+ VD+ M +I +Q E ++I +A+S P+G Sbjct: 58 KNKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQEISDAISKPVG 152
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHMP5_XENTR (Charged multivesicular body protein 5 OS=Xenopus tropicalis GN=chmp5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.261e-11 Identity = 36/98 (36.73%), Postives = 53/98 (54.08%), Query Frame = 1 Query: 76 SKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 SK K+ A++ LK+KR+YEQQ + L + ++ K T TVDA++ GA MK K ID ++ D++ + EN +IQEALS G Sbjct: 57 SKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQTNYAIQSLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYG 154
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: SNF7_DEBHA (Vacuolar-sorting protein SNF7 OS=Debaryomyces hansenii GN=SNF7 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.648e-11 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 88 NKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 NK A LKRK+ YE + ++ N + Q+ +EGA ET+ A++ GA MK + ++D V+ TMD+I EQ E +I EA+S P+G Sbjct: 56 NKALAKNALKRKKGYEANLMKIENQIDSLETQLTSIEGANLNLETMKAMKQGAQAMKQIHGEYDVDKVENTMDDIREQVELADEISEAISRPVG 149
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHMP5_XENLA (Charged multivesicular body protein 5 OS=Xenopus laevis GN=chmp5 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 36/98 (36.73%), Postives = 53/98 (54.08%), Query Frame = 1 Query: 76 SKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 SK K+ A++ LK+KR+YEQQ + L + ++ K T TVDA++ GA MK K ID ++ D++ + EN +IQEALS G Sbjct: 57 SKNMVKQKALRVLKQKRMYEQQRDNLNQQSFNMEQANYTIQTLKDTKTTVDAMKVGAKEMKKAYKQVKIDQIEDLQDQLEDMMENANEIQEALSRSYG 154
BLAST of CX069374 vs. ExPASy Swiss-Prot
Match: CHM4A_HUMAN (Charged multivesicular body protein 4a OS=Homo sapiens GN=CHMP4A PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 64 AKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSTPIG 369 AK Y KNKRAA+Q L+RK+ +EQQ+ Q + Q +E A E + + A +MK + +ID VD+ M +I EQ E +QI +A+S P+G Sbjct: 51 AKKYG-TKNKRAALQALRRKKRFEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQSMKKAYQDMDIDKVDELMTDITEQQEVAQQISDAISRPMG 151 The following BLAST results are available for this feature:
BLAST of CX069374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069374 ID=CX069374; Name=CX069374; organism=Citrus sinensis; type=EST; length=805bpback to top |