CX069369

Overview
NameCX069369
Unique NameCX069369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A1_RAT (Solute carrier family 22 member 1 OS=Rattus norvegicus GN=Slc22a1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 53/165 (32.12%), Postives = 78/165 (47.27%), Query Frame = 1
Query:   16 TTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            T   +I++E+ L C  A+   L  +    G  LG + +  +AD   GRK  L ++ L  SV+  LT  + +     L R   G+           L+TE VG+ +R    IL    FT+G + L  +AY      W  + L  S+PT ++  L Y FV ESPRWL
Sbjct:  130 TPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADR-FGRKLCLLVTTLVTSVSGVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAFTVGLVGLAGVAYA--IPDWRWLQLAVSLPTFLFL-LYYWFVPESPRWL 290          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AF_MOUSE (Solute carrier family 22 member 15 OS=Mus musculus GN=Slc22a15 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 8.940e-12
Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLL--FLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSW-TIIYLWTSIPTLVYSGLLYIFVSESPRWLF 513
            +I SEW L  + ++     ++S F+G  +G++    L+D    RK  L  F   +  +VA     FS +   +++ RF  G+    +     VLL E VGT +  L G +   FF +G      + Y  R  SW T+  L     TLV+  LL +F+ ESPRWL+
Sbjct:   96 SIASEWFLIANRSYKVSAASSSFFSGVFVGVISFGQLSDRFGRRKVYLTGFALDILFAVANG---FSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTTYWALAGSIGGLFFAVGIAQYALLGYFIR--SWRTLAVLVNLQGTLVF--LLSLFIPESPRWLY 253          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A2_RAT (Solute carrier family 22 member 2 OS=Rattus norvegicus GN=Slc22a2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 49/166 (29.52%), Postives = 82/166 (49.40%), Query Frame = 1
Query:   16 TTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIF-VSESPRWL 510
            T   +I++E+ L C+ +++  L  +    G  +G + +  LAD   GRK  L ++ L  +++ +L   S N     + RF  G+          +L+TE VG  +R +VGI     FT+G L L  +AY     +W  +    ++P   +  LLY + + ESPRWL
Sbjct:  130 TPGSSIVTEFNLVCAHSWMLDLFQSVVNVGFFIGAMMIGYLADR-FGRKFCLLVTILINAISGALMAISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRMVGICYQIAFTVGLLILAGVAYV--IPNWRWLQFAVTLPNFCF--LLYFWCIPESPRWL 290          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A1_MOUSE (Solute carrier family 22 member 1 OS=Mus musculus GN=Slc22a1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.168e-11
Identity = 52/165 (31.52%), Postives = 78/165 (47.27%), Query Frame = 1
Query:   16 TTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            T   +I++E+ L C  A+   L  +    G  LG + +  +AD   GRK  L ++ L  S++  LT  + +     L R   G+           L+TE VG+ +R    IL    FT+G + L  +AY      W  + L  S+PT ++  L Y FV ESPRWL
Sbjct:  130 TPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADR-FGRKLCLLVTTLVTSLSGVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQVAFTVGLVGLAGVAYA--IPDWRWLQLAVSLPTFLFL-LYYWFVPESPRWL 290          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A4_RAT (Solute carrier family 22 member 4 OS=Rattus norvegicus GN=Slc22a4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.525e-11
Identity = 51/162 (31.48%), Postives = 78/162 (48.15%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILD-SFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            TI++EW L C   +   L  +  F G L G      L+D   GRK +LF +    +  + + IFS N  ++++L    G+ + +      +L TE +    R L   L    FF IG + LP  AY  R   W ++ L  ++P L +   L+ F+ ESPRWL
Sbjct:  127 TIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSD-RFGRKKVLFATMAVQTGFSFVQIFSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFFAIGYMVLPLFAYFIR--DWRMLLLALTLPGL-FCVPLWWFIPESPRWL 284          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A2_RABIT (Solute carrier family 22 member 2 OS=Oryctolagus cuniculus GN=SLC22A2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.992e-11
Identity = 51/165 (30.91%), Postives = 78/165 (47.27%), Query Frame = 1
Query:   16 TTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            T   +I++E+ L C+ +++  L  ++   G  +G V +  LAD   GRK  L ++ L  + A  L   S N     + R   G+          +L+TE VG  +R  VGIL    FT+G L L  +AY      W  + L  ++P   +  L Y  + ESPRWL
Sbjct:  129 TPGSSIVTEFNLVCARSWMLDLFQSAVNIGFFIGSVGIGYLADR-FGRKLCLLVTILINAAAGVLMAVSPNYTWMLIFRLIQGLVSKAGWLIGYILITEFVGLNYRRTVGILYQVAFTVGLLVLAGVAYA--LPRWRWLQLTVTLPYFCFL-LYYWCIPESPRWL 289          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A4_MOUSE (Solute carrier family 22 member 4 OS=Mus musculus GN=Slc22a4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.601e-11
Identity = 50/162 (30.86%), Postives = 78/162 (48.15%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILD-SFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            TI++EW L C   +   L  +  F G L G      L+D   GRK +LF +    +  + + IFS N  ++++L    G+ + +      +L TE +    R +   L    FF IG + LP  AY  R   W ++ L  ++P L +   L+ F+ ESPRWL
Sbjct:  127 TIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSD-RFGRKKVLFATMAVQTGFSFVQIFSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRIIFSTLGVCTFFAIGYMVLPLFAYFIR--DWRMLLLALTLPGL-FCVPLWWFIPESPRWL 284          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AO_PONAB (Solute carrier family 22 member 24 OS=Pongo abelii GN=SLC22A24 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.397e-11
Identity = 47/166 (28.31%), Postives = 81/166 (48.80%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            T+   TI++EW L C S  +K +  +    G LLG +    L+D  +GRK +  L  L ++++ +   F+    +Y +LRF +G S  TI   T +L  E    + R +  ++    +++G + L  +A+      W ++ L  S P +V     +  V ES RWL
Sbjct:  125 TSFLSTIVTEWDLVCESQSLKSMVQSLFMAGSLLGGLIYGHLSDR-VGRKIICKLCFLQLAISNTCAAFAPTFLVYCILRFLAGFSTMTILGNTFILSLEWTLPQSRSMAIMVLLCSYSVGQMLLGGLAFA--IQDWRVLQLTVSTPIIVLFLSSWKMV-ESARWL 286          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AF_XENLA (Solute carrier family 22 member 15 OS=Xenopus laevis GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.397e-11
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1
Query:    1 DGNPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSC---LTMSVATSLT-IFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWLF 513
            DGN T+    I+SEW L   +A+  G+ ++ +F G L+G++    L+D   GRK +        +T +V  +LT IFS    ++ + RF  G+    +     VLL E +G+ +  + G L S  F +G      I Y  R  SW ++ +  ++        L + + ESPRWL+
Sbjct:   81 DGNFTS----IVSEWFLVGGAAYEVGVSSSVYFGGVLIGVICFGQLSD-RFGRKPVYVTGLALEVTFAVMNALTPIFS----MFLITRFLVGVMNGGMSLVAFVLLNECIGSSYWAIAGSLGSMCFAVGIAQFALIGYFIR--SWRLLAVLVNVQGAGVLA-LSLCIPESPRWLY 243          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AF_HUMAN (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.397e-11
Identity = 46/164 (28.05%), Postives = 83/164 (50.61%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTI-FSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIP-TLVYSGLLYIFVSESPRWLF 513
            +I SEW L  + ++     ++  F+G  +G++    L+D   GRK + +L+   + +  ++   FS +   +++ RF  G+    +     VLL E VGT +  L G +   FF +G      + Y  R  SW  + +  ++  T+V+  LL +F+ ESPRWL+
Sbjct:   96 SIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDR-FGRKKV-YLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIR--SWRTLAILVNLQGTVVF--LLSLFIPESPRWLY 253          
The following BLAST results are available for this feature:
BLAST of CX069369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
S22A1_RAT4.013e-1232.12Solute carrier family 22 member 1 OS=Rattus norveg... [more]
S22AF_MOUSE8.940e-1231.52Solute carrier family 22 member 15 OS=Mus musculus... [more]
S22A2_RAT1.168e-1129.52Solute carrier family 22 member 2 OS=Rattus norveg... [more]
S22A1_MOUSE1.168e-1131.52Solute carrier family 22 member 1 OS=Mus musculus ... [more]
S22A4_RAT1.525e-1131.48Solute carrier family 22 member 4 OS=Rattus norveg... [more]
S22A2_RABIT1.992e-1130.91Solute carrier family 22 member 2 OS=Oryctolagus c... [more]
S22A4_MOUSE2.601e-1130.86Solute carrier family 22 member 4 OS=Mus musculus ... [more]
S22AO_PONAB3.397e-1128.31Solute carrier family 22 member 24 OS=Pongo abelii... [more]
S22AF_XENLA3.397e-1129.71Solute carrier family 22 member 15 OS=Xenopus laev... [more]
S22AF_HUMAN3.397e-1128.05Solute carrier family 22 member 15 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10A08-A16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069369 ID=CX069369; Name=CX069369; organism=Citrus sinensis; type=EST; length=515bp
GATGGAAACCCTACTACTACTGCACTCACAATCATATCCGAATGGGGGCT
TGAATGTTCAAGTGCATTTATCAAAGGCCTGCCAGCAGCATCCCACTTCA
CAGGCTGTCTTCTCGGCATTGTTTTTCTGGCCACGCTCGCGGACTCATCT
CTCGGTCGTAAGAACTTGCTTTTCCTTTCGTGTTTAACGATGTCAGTAGC
AACATCCTTAACTATCTTCTCTAACAACCTCTGGATTTACTCCCTTCTGA
GATTCTTTAGTGGGATTAGCCGAGCCACGATTGGAACATGTACTATCGTG
TTACTAACGGAGAAAGTTGGGACAGAGTGGCGAGGCCTTGTCGGAATTTT
GGATTCCTTCTTCTTCACTATAGGTACATTAACATTGCCGGCAATTGCTT
ATACAAATCGAAGCTCTTCATGGACAATTATCTATTTATGGACTTCGATT
CCGACACTTGTCTACAGTGGGTTGCTTTATATTTTCGTTAGTGAGTCTCC
TAGATGGCTTTTCAT
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