DR403796

Overview
NameDR403796
Unique NameDR403796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.857e-29
Identity = 55/155 (35.48%), Postives = 87/155 (56.13%), Query Frame = 3
Query:  102 VALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTV-SKEEETMRTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            V L +  +L+ ++FA+     +RI LRK     I R + +   S E+  ++ P+ +Y++      ++     L N++DAQY+G++ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+L++
Sbjct:    6 VLLLILGLLASSSFAI-----IRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPKTTEPVSELLKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQ 153          

HSP 2 Score: 53.9138 bits (128), Expect = 4.857e-29
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2
Query:  548 FLSQDNV---------KVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            +LSQD V         K   + V+ Q F EATK+  I F+AAKFDGILG+G+  IS+   +PV+
Sbjct:  150 YLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVF 213          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.323e-29
Identity = 57/149 (38.26%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  120 LILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETM-RTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            L L+    A P   LVRI L K     I R + +     E+ + + PV +Y+              L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+L++
Sbjct:    7 LPLALCLLAAPASALVRIPLHK--FTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQ 153          

HSP 2 Score: 55.4546 bits (132), Expect = 6.323e-29
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 2
Query:  548 FLSQDNVKV-----------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            +LSQD V V           G + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS+   +PV+
Sbjct:  150 YLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVF 215          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.331e-29
Identity = 46/112 (41.07%), Postives = 62/112 (55.36%), Query Frame = 3
Query:  228 SKEEETMRTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            +  E   R P K  N    L    T  + +++F DAQY+G ++IGTP Q F V+FDTGSSNLW+PS KC  + V                  NGT   IQYG+GA+SGF+++
Sbjct:   28 ASRESRRRVPQKWSNRLSALNAGTT--IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQ 137          

HSP 2 Score: 63.1586 bits (152), Expect = 6.331e-29
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            F+SQD+V VG L VK+Q F EAT E  I F  AKFDGILGL FQ IS+    PV+
Sbjct:  134 FVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVF 188          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.219e-28
Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  120 LILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETM-RTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            L+L     A P   LVRI L K     + R + +     E+ + + P+ +Y               L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+L++
Sbjct:    7 LLLVLGLLAAPAAALVRIPLHK--FTSVRRTMTELGGPVEDLIAKGPISKYAQGAPAVTGGPIPEMLRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQ 153          

HSP 2 Score: 55.0694 bits (131), Expect = 5.219e-28
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2
Query:  548 FLSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            +LSQD V V           + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS+   +PV+
Sbjct:  150 YLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVF 213          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.152e-27
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 3
Query:  285 LGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            L D     V ++NF++AQYF E+S+GTP Q F V+ DTGSSNLWVP + C  S+                  NGT  AI+YG+G +SGF+++
Sbjct:   67 LNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDC-SSIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQ 157          

HSP 2 Score: 63.5438 bits (153), Expect = 1.152e-27
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIP 706
            F+SQD +++GDL V  QDF EAT E  + F   +FDGILGLG+  IS+ K +P
Sbjct:  154 FVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNKIVP 206          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.541e-27
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  309 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            V L N+++AQY+ ++++GTP Q F VI DTGSSNLWVPS +C  S+                  NGT  AIQYGTG++ G++++
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNEC-GSLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQ 163          

HSP 2 Score: 66.2402 bits (160), Expect = 2.541e-27
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIP 706
            ++SQD + +GDL +  QDF EAT E  +TF   KFDGILGLG+  IS+ K +P
Sbjct:  160 YISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVP 212          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.310e-27
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 3
Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLA 557
            L+N++DAQY+G ++IGTP Q+F V+FDTGSSNLWVPS +C F ++                 +NGT+  IQYG+G++SG+L+
Sbjct:   60 LSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLS 141          

HSP 2 Score: 57.3806 bits (137), Expect = 3.310e-27
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            +LS D V +G + V  Q F EA  E  + F+AAKFDGILGLG+  IS+   +PV+
Sbjct:  139 YLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVF 193          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 7.316e-27
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 3
Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLA 557
            L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGT+ AI YG+G++SG+L+
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLS 88          

HSP 2 Score: 54.6842 bits (130), Expect = 7.316e-27
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 2
Query:  572 VGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            VG + V+ Q F EATK+  +TF+AAKFDGILG+ +  IS+   +PV+
Sbjct:  104 VGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRISVNNVVPVF 150          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.237e-26
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 3
Query:  309 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            V + NFM+AQYF E++IGTP QTF V+ DTGSSNLWVPS++C  S+                 +NGTS  I+YG+G++SGF+++
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQC-GSIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQ 157          

HSP 2 Score: 54.6842 bits (130), Expect = 1.237e-26
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIP 706
            F+SQD + +GD+ + +Q F EAT E  + F   +FDGILGLG+  I++    P
Sbjct:  154 FVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITP 206          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.609e-26
Identity = 54/153 (35.29%), Postives = 75/153 (49.02%), Query Frame = 3
Query:  114 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            L L+     F LP D      +  K++  I   +   G  +++       P+KR  L      + T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NGT   ++Y TG +SGFL++
Sbjct:   13 LLLLWGSCTFGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTL-----GNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ 160          

HSP 2 Score: 49.6766 bits (117), Expect = 1.609e-26
Identity = 24/55 (43.64%), Postives = 38/55 (69.09%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            FLSQD + VG + V  Q F E T+  ++ F+ A+FDG++G+GF E +IG+  P++
Sbjct:  157 FLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIF 210          
The following BLAST results are available for this feature:
BLAST of DR403796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CATD_MOUSE4.857e-2935.48Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_HUMAN6.323e-2938.26Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_DICDI6.331e-2941.07Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CATD_CANFA5.219e-2836.91Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CARP_ASPFU1.152e-2743.48Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CARP_YEAST2.541e-2744.05Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
ASPP_AEDAE3.310e-2747.56Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_PIG7.316e-2750.00Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
CARP_NEUCR1.237e-2648.81Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
RENI_PANTR1.609e-2635.29Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246E21 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246E21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403796 ID=DR403796; Name=DR403796; organism=Citrus sinensis; type=EST; length=712bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTCTCTGTGCTCT
CTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCGCAGCCATTCG
GGTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTCGCTTTGC
CAAATGATGGATTGGTGAGAATTGGGCTGAGAAAGAAGAAATTGGATCAG
ATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAG
AACACCAGTCAAAAGATATAATCTCCATGGTGGTCTTGGAGATTCTGATA
CTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAG
GTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGG
AAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTT
GCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGG
AATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTT
CTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGG
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