DR403796 | Citrus Genome Database

Overview


Name	DR403796
Unique Name	DR403796
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	712

Libraries


Library Name	Type
Developing fruit peel at 38 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.388e-25
Identity = 42/80 (52.50%), Postives = 50/80 (62.50%), Query Frame = 3

Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFL 554
            L N+MD QYFGE+SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG +
Sbjct:   66 LINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVI 144

HSP 2 Score: 51.2174 bits (121), Expect = 8.388e-25
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 2

Query:  560 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            D+V V  ++V+NQ F E+  E   TF+ A FDGILGLG+  I++G   PV+
Sbjct:  147 DSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGCTPVF 197

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.091e-24
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 3

Query:  294 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLARTM 566
            + T  V L N++D QY+GE+ IGTP QTF V+FDTGS+NLWVPS +C                       NGT+  I+YG+G + GFL++ M
Sbjct:   70 NSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDM 161

HSP 2 Score: 50.0618 bits (118), Expect = 1.091e-24
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 2

Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            FLSQD V VG + V  Q F E T+   I F+ AKFDG+LG+GF   ++G   PV+
Sbjct:  156 FLSQDMVTVGGITV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVF 209

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.421e-24
Identity = 50/144 (34.72%), Postives = 71/144 (49.31%), Query Frame = 3

Query:  123 ILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFL 554
            IL    FA    GL+R+ L+++K   I + + +         +  +          +       L N+MD +YFGE+S+GTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG +
Sbjct:    4 ILVLLLFATLVYGLIRVPLKRQK--SIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVI 144

HSP 2 Score: 50.8322 bits (120), Expect = 1.421e-24
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 2

Query:  560 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            D V V  ++V+NQ F E+  E   TF+ A+FDGILGLG+  I++G   PV+
Sbjct:  147 DAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDCTPVF 197

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 3.128e-24
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 3

Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            L N+++AQYF E+ IGTP Q F VI DTGSSNLWVPS  C  S+                  NG+  +IQYG+G++ G++++
Sbjct:   96 LTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDC-TSLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYISQ 176

HSP 2 Score: 59.6918 bits (143), Expect = 3.128e-24
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 2

Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIP 706
            ++SQD + +GDLV+  QDF EAT E  + F   KFDGILGL +  IS+   +P
Sbjct:  173 YISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILGLAYDTISVNHIVP 225

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.131e-24
Identity = 53/156 (33.97%), Postives = 79/156 (50.64%), Query Frame = 3

Query:  114 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVKRYNLHGGLGDSDTDIVA---LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            L L+ SP  F+LP  G     +  KK+  +  ++   G  +++         KR +L        TD+++   L N++++QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +                  NG    I YG+G + GFL++
Sbjct:   11 LLLLWSPCTFSLPT-GTTFERIPLKKMPSVREILEERGVDMTRLSAEWDVFTKRSSL--------TDLISPVVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQ 157

HSP 2 Score: 49.6766 bits (117), Expect = 3.131e-24
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 2

Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            FLSQD+V VG + V  Q F E T+   I F+ A+FDG+LG+GF   ++G   PV+
Sbjct:  154 FLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLGMGFPAQAVGGVTPVF 207

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.978e-23
Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 3

Query:  300 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLARTM 566
            T  V L N++D QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC                       NGT   I YG+G + GFL++ +
Sbjct:   67 TSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQDL 156

HSP 2 Score: 46.9802 bits (110), Expect = 1.978e-23
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 2

Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            FLSQD V VG + V  Q F E T+     F+ AKFDG+LG+GF   ++G   PV+
Sbjct:  151 FLSQDLVTVGGITV-TQTFGEVTELPLRPFMLAKFDGVLGMGFPAQAVGGVTPVF 204

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.571e-23
Identity = 44/84 (52.38%), Postives = 52/84 (61.90%), Query Frame = 3

Query:  309 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLA 557
            V L+N+ D QYFGE+ +GTP Q FTV FDTGSSNLWVPS +C +FSV                  NGT  AIQYGTG + G L+
Sbjct:   68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILS 151

HSP 2 Score: 40.0466 bits (92), Expect = 2.571e-23
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 2

Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI 691
            LS+D + +G +   +  F EA  E S+ F  A FDGILGLGF  +S+
Sbjct:  150 LSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSV 196

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATE_RAT (Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 4.657e-22
Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 3

Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFL 554
            L N++D +YFG VSIG+PSQ FTVIFDTGSSNLWVPS  C  S                    G   +IQYGTG+++G +
Sbjct:   72 LINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYC-TSPACKAHPVFHPSQSSTYMEVGNHFSIQYGTGSLTGII 150

HSP 2 Score: 50.8322 bits (120), Expect = 4.657e-22
Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 2

Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            +  D V V  L V+ Q F E+ KE   TF+ A+FDGILGLG+  +++G   PV+
Sbjct:  150 IGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAVGGVTPVF 203

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.886e-22
Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 3

Query:  312 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFL 554
            +L N++DA+YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S+                     + +I YGTG+++G L
Sbjct:   66 SLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYC-SSLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGIL 145

HSP 2 Score: 49.2914 bits (116), Expect = 7.886e-22
Identity = 27/54 (50.00%), Postives = 32/54 (59.26%), Query Frame = 2

Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            L  D VKVG++   NQ F  +  E  ITFL A FDGILGL +  IS   A PV+
Sbjct:  145 LGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAYPSISASDATPVF 198

[Close]

BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.258e-21
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 3

Query:  159 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFL 554
            G++R+ L+++K   + +++ +         +   +   L       +T    L N++D +YFG++SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG +  IQYGTG ++G L
Sbjct:   16 GIIRVPLKRQK--SMRKILKEKGKLSHLWTKQGNEFLQLSDSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC-TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGIL 144

HSP 2 Score: 44.2838 bits (103), Expect = 2.258e-21
Identity = 21/54 (38.89%), Postives = 31/54 (57.41%), Query Frame = 2

Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            L  D V V  + V++Q F E+  E   TF  + FDGILGL +  +++   IPV+
Sbjct:  144 LGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVF 197

The following BLAST results are available for this feature:

BLAST of DR403796 vs. ExPASy Swiss-Prot

BLAST of DR403796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91


Match Name	E-value	Identity	Description
CATEB_XENLA	8.388e-25	52.50	Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=...	[more]
RENI_CANFA	1.091e-24	43.48	Renin OS=Canis familiaris GN=REN PE=2 SV=1	[more]
CATEA_XENLA	1.421e-24	34.72	Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=...	[more]
CARPV_CANAL	3.128e-24	43.90	Vacuolar aspartic protease OS=Candida albicans GN=...	[more]
RENI2_MOUSE	3.131e-24	33.97	Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1	[more]
RENI_SHEEP	1.978e-23	45.56	Renin OS=Ovis aries GN=REN PE=2 SV=1	[more]
NAPSA_HUMAN	2.571e-23	52.38	Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1	[more]
CATE_RAT	4.657e-22	48.75	Cathepsin E OS=Rattus norvegicus GN=Ctse PE=1 SV=3	[more]
PEPA1_RABIT	7.886e-22	46.91	Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1	[more]
CATE_RANCA	2.258e-21	34.85	Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CSAH-PNP1246E21 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246E21 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DR403796 ID=DR403796; Name=DR403796; organism=Citrus sinensis; type=EST; length=712bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTCTCTGTGCTCT
CTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCGCAGCCATTCG
GGTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTCGCTTTGC
CAAATGATGGATTGGTGAGAATTGGGCTGAGAAAGAAGAAATTGGATCAG
ATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAG
AACACCAGTCAAAAGATATAATCTCCATGGTGGTCTTGGAGATTCTGATA
CTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAG
GTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGG
AAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTT
GCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGG
AATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTT
CTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGG