DR403796

Overview
NameDR403796
Unique NameDR403796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.233e-15
Identity = 29/91 (31.87%), Postives = 46/91 (50.55%), Query Frame = 3
Query:  294 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLARTM 566
            S  D + L +F +  ++G+  +G   Q FT I DTGS+NLWVPS KC  +                  ++GT   + Y +G +SGF ++ +
Sbjct:  125 SSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDL 214          

HSP 2 Score: 41.9726 bits (97), Expect = 3.233e-15
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEA--TKEASITFLAAKFDGILGLGFQEISIGKAIPV 709
            F S+D V VG+L +  + FIE   T     T+ A+ FDGILGLG++++SIG   P+
Sbjct:  209 FFSKDLVTVGNLSLPYK-FIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPI 263          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.246e-15
Identity = 37/80 (46.25%), Postives = 45/80 (56.25%), Query Frame = 3
Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFL 554
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G L
Sbjct:   67 LVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVL 145          

HSP 2 Score: 32.3426 bits (72), Expect = 3.246e-15
Identity = 19/54 (35.19%), Postives = 26/54 (48.15%), Query Frame = 2
Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            L  D V+V  +   NQ F  +  E       + FDGILGL +  I+   A PV+
Sbjct:  145 LGYDTVQVAGIADTNQIFGLSQTEPGSFLYYSPFDGILGLAYPNIASSGATPVF 198          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.122e-15
Identity = 39/97 (40.21%), Postives = 48/97 (49.48%), Query Frame = 3
Query:  267 YNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLA 557
            Y L  G  D D     L N++D  Y G +SIGTP Q F V+ DTGS++LWVPS  C  S                   +G    I YG+G +SGFLA
Sbjct:   50 YKLLSGQQDPDVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYC-SSPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLA 145          

HSP 2 Score: 32.7278 bits (73), Expect = 7.122e-15
Identity = 20/55 (36.36%), Postives = 28/55 (50.91%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            FL+ D V++  LV   Q F  + +E       A FDGILGL +  +S     PV+
Sbjct:  143 FLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVF 197          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 9.301e-15
Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 3
Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            + N  D +Y+G +SIGTP ++F VIFDTGSSNLWV S+ C  +                    G +  + YGTG + G L +
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQ 86          

HSP 2 Score: 40.0466 bits (92), Expect = 9.301e-15
Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 2
Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            L QD V VG     NQ+  E+  E      AA FDGILGL +  I+   A+PV+
Sbjct:   84 LGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVF 137          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.562e-14
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 3
Query:  321 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 434
            N++D+ YFGE+SIGTP Q F ++FDTGSSNLWVPS  C
Sbjct:   68 NYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYC 105          

HSP 2 Score: 34.6538 bits (78), Expect = 1.562e-14
Identity = 16/47 (34.04%), Postives = 27/47 (57.45%), Query Frame = 2
Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI 691
            L  D V V ++V+ NQ F  +  E +  F  + FDGILG+ +  +++
Sbjct:  144 LGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAV 190          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.268e-13
Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 3
Query:  258 VKRYNLHGGLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY 437
            ++++ L G L       + L N++D  Y G ++IGTP Q F+VIFDT SS+LWVPS +C+
Sbjct:   49 IQKFGLKGSLCSPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH 108          

HSP 2 Score: 34.2686 bits (77), Expect = 1.268e-13
Identity = 19/54 (35.19%), Postives = 28/54 (51.85%), Query Frame = 2
Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            L  D V++G    +NQ F  +  E       A FDG+LGLG+  ++I    PV+
Sbjct:  146 LGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVF 199          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.648e-13
Identity = 26/47 (55.32%), Postives = 31/47 (65.96%), Query Frame = 3
Query:  294 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 434
            S+  I  L N MD  Y G ++IGTP Q F V+FDTGSS+L VPS  C
Sbjct:   56 SNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINC 102          

HSP 2 Score: 41.5874 bits (96), Expect = 1.648e-13
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 2
Query:  548 FLSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVW 712
            F++ D V++GDLV  +Q F     E+   +L   FDGILGL + +IS   AIP++
Sbjct:  143 FVAHDTVRIGDLVSTDQPFGLIFLES---WLDIPFDGILGLNYPKISFSGAIPIF 194          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 3.790e-12
Identity = 34/117 (29.06%), Postives = 58/117 (49.57%), Query Frame = 3
Query:  237 EETMRTPVKRYNLH-------GGLGDSDTDIVALNNF-MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFLAR 560
            +  ++  + +YN H       G + D+    V + ++  D +Y+G+V+IGTP + F + FDTGSS+LW+ S  C  +                   +G + +I YG G + SG LA+
Sbjct:   43 KNAIQKAIAKYNKHKINTSTGGIVPDAGVGTVPMTDYGNDVEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLC--TNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAK 157          

HSP 2 Score: 39.2762 bits (90), Expect = 3.790e-12
Identity = 20/51 (39.22%), Postives = 31/51 (60.78%), Query Frame = 2
Query:  551 LSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAI 703
            L++DNV +G L++K Q  IE  K  + +F     DG+LGLGF  I+  + +
Sbjct:  155 LAKDNVNLGGLLIKGQT-IELAKREAASFANGPNDGLLGLGFDTITTVRGV 204          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.300e-12
Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 3
Query:  315 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFLAR 560
            +N+F D +Y G ++IGTP Q F V+ DTGSSNLW+P   C                     +NG S  IQYG+G  +G L +
Sbjct:   63 VNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC--KTNCKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQ 142          

HSP 2 Score: 26.1794 bits (56), Expect = 8.300e-12
Identity = 20/57 (35.09%), Postives = 26/57 (45.61%), Query Frame = 2
Query:  551 LSQDNVKVG-----DLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIP 706
            L QD V+ G      L V    F  A+K  S  F     DGILGL F  +++   +P
Sbjct:  140 LGQDTVRFGAKGDSQLSVPTTTFGIASK-ISADFKNDATDGILGLAFTSLAVDGVVP 195          
BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 3
Query:  291 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY 437
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +
Sbjct:    1 DSGSTVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKAH 49          
The following BLAST results are available for this feature:
BLAST of DR403796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
PLM2_PLAFA3.233e-1531.87Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
PEPA_SUNMU3.246e-1546.25Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPAF_RABIT7.122e-1540.21Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEP2B_GADMO9.301e-1537.80Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
PEPB_CANFA1.562e-1468.42Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PAG1_PIG1.268e-1345.00Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PAG1_SHEEP1.648e-1355.32Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
CARP_RHICH3.790e-1229.06Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
ASP6_CAEEL8.300e-1239.02Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]
CARDG_CYNCA1.336e-1165.31Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246E21 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246E21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403796 ID=DR403796; Name=DR403796; organism=Citrus sinensis; type=EST; length=712bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTCTCTGTGCTCT
CTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCGCAGCCATTCG
GGTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTCGCTTTGC
CAAATGATGGATTGGTGAGAATTGGGCTGAGAAAGAAGAAATTGGATCAG
ATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAG
AACACCAGTCAAAAGATATAATCTCCATGGTGGTCTTGGAGATTCTGATA
CTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAG
GTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGG
AAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTT
GCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGG
AATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTT
CTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGG
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