DR403796

Overview
NameDR403796
Unique NameDR403796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR403796 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 3 
Query:  291 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY 437
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +
Sbjct:    1 DSGSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAH 49
The following BLAST results are available for this feature:
BLAST of DR403796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CARDH_CYNCA2.278e-1165.31Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246E21 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246E21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403796 ID=DR403796; Name=DR403796; organism=Citrus sinensis; type=EST; length=712bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTCTCTGTGCTCT
CTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCGCAGCCATTCG
GGTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTCGCTTTGC
CAAATGATGGATTGGTGAGAATTGGGCTGAGAAAGAAGAAATTGGATCAG
ATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAG
AACACCAGTCAAAAGATATAATCTCCATGGTGGTCTTGGAGATTCTGATA
CTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAG
GTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGG
AAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTT
GCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGG
AATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTT
CTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGG
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