CX054053

Overview
NameCX054053
Unique NameCX054053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: CRU1_BRANA (Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.245e-26
Identity = 88/308 (28.57%), Postives = 134/308 (43.51%), Query Frame = 3
Query:   84 CNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYV-----IQGRGIHG--------AVFP-------------------------GCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL-GGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXXGSGXHGIEETICTMKLKHNIN 890
            C +  LNALEP   +++EAG  E WD +  QL+C+ V+  R+ I+ +GL +PS+ +T +L +V     + GR + G        +VF                          G  +                   HQKV  IR GD +A   G A W YNDG   LV+V+++D+ +  NQLD+  R FYL G NPQ Q+                           N+  GF   +LA+AF ++     +LQ  Q  +G I+RV+    V+ P              +  +G+EETIC+ +   N++
Sbjct:   30 CQLDQLNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPSGGSPSGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQV----------------WIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRVQGPFSVIRP-----PLRSQRPQETEVNGLEETICSARCTDNLD 316          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: CRUA_BRANA (Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26
Identity = 87/310 (28.06%), Postives = 129/310 (41.61%), Query Frame = 3
Query:   84 CNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVI----------------------------------------QGRGIHGAVFPGCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYL-GGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXXGSGXHGIEETICTMKLKHNIN 890
            C +  LNALEP   +++EAG  E WD +  QL+C+ V+  R+ I+ +GL +PS+ +T  L +V                                         QG+G  G    G  +                   HQKV  IR GD +A   G A W YNDG   LV+V+++D+ +  NQLD+  R FYL G NPQ Q+                           N+  GF   +LA+AF ++     +LQ  Q  +G I+RV+    V+ P                 +G+EETIC+ +   N++
Sbjct:   30 CQLDQLNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFSTARLSFVAKGEGLMGRVVLCAETFQDSSVFQPSGGSPFGEGQGQGQQGQGQGHQGQ---GQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQV----------------WIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRVQGPFSVIRP------PLRSQRPQEEVNGLEETICSARCTDNLD 314          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: CRU2_BRANA (Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.129e-19
Identity = 86/315 (27.30%), Postives = 121/315 (38.41%), Query Frame = 3
Query:   84 CNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQC-----------------------ANVAVFRHRIQQRGLVVPSYTNTPELFYVIQ----------------------GRGIHGAVFPGCPETYXXXXXXXXXXXXXXXXXHQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG-NPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXXGSGXHGIEETICTMKLKHNIN 890
            C +  LNALEP   +++EAG  E WD +  QL+C                       ANV+         G VVP    T +   V Q                      G+G  G    G  +                   HQKV  IR GD +A   G A W YN+G   LV+VA++D+ +  NQLD+   +FYL G NPQ Q                            N+  GF   +LA+AF ++     +LQ  Q  +G IVRV+    V+ P              +  +G+EETIC+ +   N++
Sbjct:   30 CQLDQLNALEPSHVLKAEAGRIEVWDHHAPQLRCSGVSFVRYIIESQGLYLPSFLNTANVSFVAKGQGLMGRVVPGCAETFQDSSVFQPGSGSPFGEGQGQGQQGQGQGQGQG-QGKGQQGQGKGQQGQSQGQQGQGQGFRDMHQKVEHIRSGDTIATHPGVAQWFYNNGNQPLVIVAVMDLASHQNQLDRNPSQFYLAGKNPQGQ----------------SWLHGRGQQPQNNILNGFSPEVLAQAFKIDVRTAQQLQNQQDNRGNIVRVQGPFGVIRP-----PLKSQRPQETEANGLEETICSARCTDNLD 322          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: CRU3_BRANA (Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.474e-19
Identity = 59/177 (33.33%), Postives = 87/177 (49.15%), Query Frame = 3
Query:  378 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXXGSG------XHGIEETICTMKLKHNIN 890
            HQKV  +R GD++A+  GS++WIYN G   LV++ L+D+ N  NQLD+  R F L GN  PQ                            N+  GFD ++LA+A  ++  L  +LQ  Q  +G IVRV+   +V+ P   +           G       +G+EETIC+M+   NI+
Sbjct:  177 HQKVEHVRHGDIIAITAGSSHWIYNTGDQPLVIICLLDIANYQNQLDRNPRTFRLAGN-NPQ-----------------GGSQQQQQQQQNMLSGFDPQVLAQALKIDVRLAQELQNQQDSRGNIVRVKGPFQVVRPPLRQPYESEQWRHPRGPPQSPQDNGLEETICSMRTHENID 335          

HSP 2 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 38/81 (46.91%), Postives = 60/81 (74.07%), Query Frame = 3
Query:   84 CNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVIQGRGIHGAVFPGCPETY 326
            CN+ +L+ L+P + ++SEAG  E+WD N+ Q++CA V+V R  I+Q GL +P++ ++P++ YV+QG GI G V PGC ET+
Sbjct:   37 CNLDNLDVLQPTETIKSEAGRVEYWDHNNPQIRCAGVSVSRVIIEQGGLYLPTFFSSPKISYVVQGMGISGRVVPGCAETF 117          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: 13S3_FAGES (13S globulin seed storage protein 3 OS=Fagopyrum esculentum GN=FAGAG1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.603e-19
Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 3
Query:   84 CNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVIQGRGIHGAVFPGCPETY 326
            C+IQ L A EP +RV SEAGVTE WD +  + +CA     R  IQ  GL++PSY+N P + +V QGRG+ G V PGCPET+
Sbjct:   44 CDIQRLTASEPSRRVRSEAGVTEIWDHDTPEFRCAGFVAVRVVIQPGGLLLPSYSNAPYITFVEQGRGVQGVVVPGCPETF 124          

HSP 2 Score: 82.0333 bits (201), Expect = 4.908e-15
Identity = 54/184 (29.35%), Postives = 88/184 (47.83%), Query Frame = 3
Query:  378 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG---NPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAF-NVNPDLISKLQRPQMQKGIIVRVEE-ELRV-------LSPQRGRXXXXXXXXXGSG-XHGIEETICTMKLKHNIN 890
            HQK+ +IR+GD++  P G   W +N+G ++L+ + L D  +  NQLD+ +R F+L G     +                              N+  GF++ +L E F NV+ + ISKL+    Q+G IV+  + +LRV       L  +RG          GSG  +G+E+  C +K + N+N
Sbjct:  185 HQKIFRIRDGDVIPSPAGVVQWTHNNGDNDLISITLYDANSFQNQLDENVRNFFLAGQSKQSREDRRSQRQTREEGSDRQSRESQDDEALLEANILSGFEDEILQEIFRNVDQETISKLRGENDQRGFIVQARDLKLRVPEEYEEELQRERG-----DRKRGGSGRSNGLEQAFCNLKFRQNVN 363          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: 13S1_FAGES (13S globulin seed storage protein 1 OS=Fagopyrum esculentum GN=FA02 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 3
Query:   84 CNIQDLNALEPQQRVESEAGVTEFWDQNDEQLQCANVAVFRHRIQQRGLVVPSYTNTPELFYVIQGRGIHGAVFPGCPETY 326
            C++Q L A EP +RV SEAGVTE WD +  + +CA     R  IQ  GL++PSY+N P + +V QGRG+ G V PGCPET+
Sbjct:   44 CDVQRLTASEPSRRVRSEAGVTEIWDNDTPEFRCAGFVAVRVVIQPGGLLLPSYSNAPYITFVEQGRGVQGVVVPGCPETF 124          

HSP 2 Score: 82.8037 bits (203), Expect = 2.877e-15
Identity = 56/184 (30.43%), Postives = 86/184 (46.74%), Query Frame = 3
Query:  378 HQKVRQIREGDLVALPTGSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGG---NPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAF-NVNPDLISKLQRPQMQKGIIVRVEE-ELRV-------LSPQRGRXXXXXXXXXGSG-XHGIEETICTMKLKHNIN 890
            HQK+ +IR+GD++  P G   W +NDG ++L+ + L D  +  NQLD  +R F+L G     +                              N+  GF + +L E F NV+ + ISKL+    Q+G IV+  + +LRV       L  +RG          GSG  +G+E+  C +K K N+N
Sbjct:  215 HQKIFRIRDGDVIPSPAGVVQWTHNDGDNDLISITLYDANSFQNQLDGNVRNFFLAGQSKQSREDRRSQRQTREEGSDRQSRESDDDEALLEANILTGFQDEILQEIFRNVDQETISKLRGDNDQRGFIVQARDLKLRVPEEYEEELQRERG-----DRKRGGSGRSNGLEQAFCNLKFKQNVN 393          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: LEGB6_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 49/163 (30.06%), Postives = 73/163 (44.79%), Query Frame = 3
Query:  429 GSANWIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXXXXX------NLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSP----QRGRXXXXXXXXXGSGXHGIEETICTMKLKHNI 887
            G   W YN+G   LV ++L+D  N  NQLD   R FYLGGNP+ +                                  ++  GF    LA+ FN   D   +L+ P+ ++  IVRVE  LR+++P    +              G +G+EETIC++K++ NI
Sbjct:    1 GIPYWTYNNGDEPLVAISLLDTSNIANQLDSTPRVFYLGGNPEVEFPETQEEQQERHQQKHSLPVGRRGGQHQQEEDGNSVLSGFSSEFLAQTFNTEEDTAKRLRSPRDKRNQIVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENI 163          
BLAST of CX054053 vs. ExPASy Swiss-Prot
Match: LEGK_PEA (Legumin K (Fragment) OS=Pisum sativum GN=LEGK PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 49/182 (26.92%), Postives = 71/182 (39.01%), Query Frame = 3
Query:  441 WIYNDGPSELVVVALVDVGNSDNQLDQFLRKFYLGGNPQPQL------------XXXXXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLISKLQRPQMQKGIIVRVEEELRVLSPQRGRXXXXXXXXXGSGXH---------------------GIEETICTMKLKHNI 887
            W YN G   LV ++L+D  N  NQLD   R FYLGGNP+ +                                        ++  G     LA+ FN   D   +L+ P+ ++  IVRVE  LR+++P +G+          S  H                     G+EETIC+ K++ NI
Sbjct:    4 WTYNHGDEPLVAISLLDTSNIANQLDSTPRVFYLGGNPETEFPETQEEQQGRHRQKHSYPVGRRSGHHQQEEESEEQNEGNSVLSGVSSEFLAQTFNTEEDTAKRLRSPRDERSQIVRVEGGLRIINP-KGKEEEEEKEQSHSHSHREEEEEEEEDEEKQRSEERKNGLEETICSAKIRENI 184          
The following BLAST results are available for this feature:
BLAST of CX054053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CRU1_BRANA1.245e-2628.57Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=... [more]
CRUA_BRANA3.623e-2628.06Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1[more]
CRU2_BRANA1.129e-1927.30Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=... [more]
CRU3_BRANA1.474e-1933.33Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=... [more]
13S3_FAGES5.603e-1953.0913S globulin seed storage protein 3 OS=Fagopyrum e... [more]
13S1_FAGES7.317e-1951.8513S globulin seed storage protein 1 OS=Fagopyrum e... [more]
LEGB6_VICFA6.410e-1530.06Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE... [more]
LEGK_PEA4.300e-1126.92Legumin K (Fragment) OS=Pisum sativum GN=LEGK PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9H11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H11-O22-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054053 ID=CX054053; Name=CX054053; organism=Citrus sinensis; type=EST; length=890bp
TCCACGCCTGCTTTGCTCAGATAGCGCAGGGAACAGACGCAACTCGGGAG
CAACGGCAACAGCAGCAACGCTTCCAAACCCAGTGTAATATCCAGGACCT
CAACGCCCTCGAACCCCAACAACGGGTAGAGTCCGAAGCTGGCGTCACAG
AGTTCTGGGACCAGAACGACGAGCAGTTACAATGCGCCAATGTTGCCGTG
TTTCGCCACCGTATCCAACAGAGAGGCCTCGTTGTGCCTTCATACACCAA
CACTCCTGAGCTCTTCTATGTTATTCAAGGTAGAGGCATTCACGGTGCTG
TATTCCCCGGATGTCCCGAGACATACCAAGAATCACAGCAAAGGTCGTCA
GAGAGTCAGAGTAGATCCCAAGATCAACACCAAAAAGTTAGACAAATACG
TGAGGGTGATCTGGTTGCATTGCCTACTGGATCGGCTAACTGGATTTACA
ACGATGGCCCATCAGAGCTTGTTGTGGTCGCTCTTGTTGATGTTGGCAAT
TCTGATAACCAGCTTGATCAGTTCTTGAGGAAATTCTACCTTGGTGGCAA
CCCACAACCACAACTCCAAGGTTACAGTCAAAGTCAAGGCAGCAGATATC
AGGGAAGCCAAGGCGGGGAGGGTGGCGACCGCAGCAGGAGAGGTGGCAAT
CTCTTCCGCGGCTTTGACGAGCGTCTGTTGGCTGAGGCCTTCAACGTGAA
CCCAGATCTAATCAGTAAACTGCAGAGGCCACAGATGCAGAAGGGGATTA
TTGTCAGAGTCGAGGAAGAGCTGAGAGTACTGTCACCTCAAAGAGGCAGA
GAACAAGAACAAGAACAAGAATTCCAAGGAAGCGGAGANCACGGCATCGA
GGAAACTATCTGTACAATGAAGCTAAAGCACAACATCAAT
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