CX054048

Overview
NameCX054048
Unique NameCX054048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14
Identity = 56/187 (29.95%), Postives = 95/187 (50.80%), Query Frame = 1
Query:  193 IPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMAC----AQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG----IRMNYYPPCAQANRVIGLTPHSD 729
            +P+ID+S  +D+    + E   A K+ GF Q++NHGV ++V+  M+   E+FF LP  +K +        PN +  +  A   +  +K  W D L L        + + WP  P  LR  IE+++ + + V   LL+L+ + +GI+    A  FE  + G    + +N+YP C   ++ +G  PH D
Sbjct:   35 LPIIDLSCGRDEVRRSILE---AGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRL--FSGATYDTGGEKY-WRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQ----ADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCD 211          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 1
Query:  118 SKEIPSRYIRPELDDEQVL-----ADGSLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRT--TSLWPTIPTSLR---ATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLAS------LFEDGIQGIRMNYYPPCAQANRVIGLTPHSDS 732
            ++ +P  +  P L D  V+       G   +PV+DM      D        LA +D G   L  HGVP +++ +++  I   F LP  EKM   + P    GYG   + S   K  W +       PAN+R+    LWP      R   A +EE+  E++ +   LL+L    LG+   ++A+      + E     + +N+YP C    R +GL  H+DS
Sbjct:   19 ARRVPETHAWPGLHDHPVVDGSGAGGGPDAVPVVDMR-----DPCAAEAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTF--SPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDS 232          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14
Identity = 50/185 (27.03%), Postives = 94/185 (50.81%), Query Frame = 1
Query:  190 HIPVIDMSKLQDDDDDELAEFHL-ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDS 732
            + P+I++ KL  D+     E    AC++ GF +L+NHG+P +V++ ++   +  +K  +E++         +   G   V ++   LDW    FL   P +    S  P +    R  + +++  L+K+   LL L+ +NLG+E G L + F   +    G +++ YPPC + + + GL  H+D+
Sbjct:    3 NFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQR-----FKELVASKGLEAVQAEVTDLDWESTFFLRHLPTS--NISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 180          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14
Identity = 53/209 (25.36%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  196 PVIDMSKLQDDDDDELAE-FHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810
            P+I++  + DD   ++ E    AC++ GF +L+NHG+P + ++ ++    + +K  +EE+     L   +E   QA V      +DW    FL   P +    S    +    +  ++E++ +L+ +   LL L+ +NLG+E G L   F   +    G +++ YPPC + + + GL  H+D+                  K G W+ V
Sbjct:    5 PIINLENINDDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEA-AQAEV----NDMDWESTFFLRHLPES--NISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDV 206          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.623e-14
Identity = 52/211 (24.64%), Postives = 99/211 (46.92%), Query Frame = 1
Query:  190 HIPVIDMSKLQDDDD-DELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810
            + P+I++ KL   +  D +     AC++ GF +L+NHG+P +V++ ++   +  +K  +E++         +   G   V ++   LDW    FL   P  +      P +    R  + +++  L+K+   LL L+ +NLG+E G L  +F   +    G +++ YPPC + + + GL  H+D+                  K G+W+ V
Sbjct:    3 NFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQR-----FKELVASKGLEAVQAEVTDLDWESTFFLRHLP--VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDV 206          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.623e-14
Identity = 56/187 (29.95%), Postives = 100/187 (53.48%), Query Frame = 1
Query:  196 PVIDMSKLQDDDDDE-LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMA--CAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQ--GIRMNYYPPCAQANRVIGLTPHSDS 732
            PVI+M  LQ       +A    AC++ GF +L+NHG+  +++ +++   +E ++   E++     ++  +S+E       V  D  LDW    FL   P +    S  P +    RAT++E++ EL+K+   LL L+ ++LG+E G L  +F    DG+   G +++ YPPC + + + GL  H+D+
Sbjct:    7 PVINMELLQGSQRPAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASKTLDSVEN------VDPDN-LDWESTFFLRHLPTS--NISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDA 184          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.120e-14
Identity = 48/183 (26.23%), Postives = 97/183 (53.01%), Query Frame = 1
Query:  196 PVIDMSKLQDDDDDE-LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDS 732
            PVI+M K+  ++    +   + AC++ GF +L+NHG+P ++++ ++   +  +K  +E++        ++EG     + ++   +DW    FL   P +    S  P +    R  +++++  L+K+  +LL L+ +NLG+E G L   F   +    G ++  YPPC +A+ + GL  H+D+
Sbjct:    5 PVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLPQS--NISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDA 180          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14
Identity = 53/215 (24.65%), Postives = 95/215 (44.19%), Query Frame = 1
Query:  112 SNSKEIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF-------EDGIQG-IRMNYYPPCAQANRVIGLTPHSDS 732
            +N+K +P  ++  + + E      S  IPVI +S     + +E      AC++ G   + +HGV   ++  +   ++  F LP+  K+   + P+   GYG   +     KL W +   ++        T LWP         +EEY   +  ++  L+ ++  +LG+    L  L         D IQ  +++N YP C   +  +GL PH+DS
Sbjct:   24 TNTKTLPDSHVWSKPEPETT----SGPIPVISLS-----NPEEHGLLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDS 229          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14
Identity = 53/215 (24.65%), Postives = 103/215 (47.91%), Query Frame = 1
Query:  187 LHIPVIDMSKLQDDDDDE----LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810
            ++ P+IDM KL + +  E    L +   AC + GF Q++NH +  ++++K++   +E +K   E+K       + ++  G     S+   +DW    +L  +P +    S  P +    R  ++E++ ++++++  LL L+ +NLG+E   L + F        G +++ YPPC + + + GL  H+D+                  K G WV V
Sbjct:    5 VNFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQK-----FKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTS--NISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDV 212          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.769e-14
Identity = 53/211 (25.12%), Postives = 100/211 (47.39%), Query Frame = 1
Query:  190 HIPVIDMSKLQDDDDDELAEFHL-ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810
            + P+I + K+   +     E    AC++ GF +L+NHG+P +V++ ++   +  +K  +E++        ++EG     V ++   +DW    FL   P  I   S  P +    R  + +++  L+K+   LL L+ +NLG+E G L + F   +    G +++ YPPC + + + GL  H+D+                  K G+W+ V
Sbjct:    3 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLP--ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDV 206          
The following BLAST results are available for this feature:
BLAST of CX054048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
IDS3_HORVU1.243e-1429.952'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
G3O22_WHEAT1.243e-1428.51Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
ACCO1_SOLLC1.243e-1427.031-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO1_CUCME1.243e-1425.361-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO_TOBAC1.623e-1424.641-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO2_DORSP1.623e-1429.951-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_DIOKA2.120e-1426.231-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
G3OX3_ARATH2.769e-1424.65Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCO_DIACA2.769e-1424.65Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_PETHY2.769e-1425.121-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9H08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H08-O16-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054048 ID=CX054048; Name=CX054048; organism=Citrus sinensis; type=EST; length=815bp
AAAAGCTAGGAGAATAATACCCCAAAAGAGAGTTGCGAAATGGAAACTGC
AGTTGACAAGAAAAATGTCTACGGCGGTTCTTTACCTGTAGAAAATGTTC
AAGCTCTTGCATCTAATTCCAAGGAAATCCCATCCCGGTACATCCGACCA
GAACTTGATGATGAGCAAGTTCTCGCTGATGGATCACTTCATATTCCAGT
GATTGATATGAGCAAGCTTCAGGACGATGATGATGATGAATTGGCAGAGT
TCCATTTGGCTTGCAAAGACTCGGGCTTCCTCCAGTTGATCAATCACGGG
GTACCAGAAAAAGTAATTGAGAAGATGAAAACTGACATTGAGGAATTCTT
TAAGCTGCCATTAGAGGAGAAGATGGCTTGCGCACAGCTGCCAAATAGCA
TTGAAGGTTATGGGCAAGCTTTCGTTGTCTCCAAGGATCAAAAGCTTGAT
TGGGGAGACATGCTTTTTCTTCTTACTCAACCTGCCAATATTAGAACCAC
GAGTCTCTGGCCTACCATCCCTACTTCTTTAAGAGCAACCATAGAGGAAT
ACTCTTTGGAACTGCAAAAGGTTACAATCTTTCTGTTGAAGTTGATGGCT
AAGAATTTGGGGATTGAACCTGGGAAACTTGCAAGCTTGTTTGAAGATGG
TATACAAGGAATAAGAATGAATTATTATCCACCATGTGCCCAGGCCAACA
GGGTTATTGGTCTCACTCCACACTCTGACTCTGTTGCATTAACATTGTTG
GTTCAAGTGAACCAAGTACAAGGTTTACAGGTAAAGAAATATGGCAAGTG
GGTACCAGTCAAACC
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