CX054047

Overview
NameCX054047
Unique NameCX054047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 72/220 (32.73%), Postives = 107/220 (48.64%), Query Frame = -2
Query:  235 IEGYGQAFVVSKDQ----KLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFE-DGIQGI-RMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVE--DRAIYKNITHEEFI 870
            IEGYG        +    K  W D LF    P ++     WP  P S R   EEY+  L  V   L +L++  LG+E  +L      D ++ + ++NYYPPC + +  +G+  H+D                  K  G+W  VK IP A +I+IGD +EIMSNG+Y S+ HR  VN +K R+S   F  P  +  +GP P  V   ++  YK   + +++
Sbjct:  110 IEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKD-GRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPKYKTKKYGDYV 328          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 62/215 (28.84%), Postives = 111/215 (51.63%), Query Frame = -2
Query:  202 LDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLP----NSVEDRAIYKNITHEEFIKLVVTSKLDGK 825
            +DW    FL   P +    S  P +    R  +++++  L+K+  +LL L+ +NLG+E G L   F   +    G ++  YPPC +A+ + GL  H+D+                + K  +W+ V P+  + +IN+GD +E+++NG+YKS+ HR V   +  R+S+A+F++P  +  I P P      VE++ +Y     ++++KL    K   K
Sbjct:   84 MDWESTYFLRHLPQS--NISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAK 296          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.922e-24
Identity = 61/207 (29.47%), Postives = 107/207 (51.69%), Query Frame = -2
Query:  208 DWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGK-WVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRAIYKN-ITHEEFIKLVVTSKLD 822
            DW +++   + P   R  S WP  P   R+  +EYS +L  +   LL+++++ + ++   L +   D  Q + +N+YP C Q +  +GL  H+D                  +  GK W+ V+P+ GAF++N+GD    +SNG +K+ +H+AVVN    RLS+A F +P    T+ PL     ++A+ +  IT  E  +  ++  L+
Sbjct:  127 DWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLE 333          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 62/207 (29.95%), Postives = 106/207 (51.21%), Query Frame = -2
Query:  208 DWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGK-WVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRAIYK-NITHEEFIKLVVTSKLD 822
            DW +++   + P   R  S WP  P + R   ++YS EL  +   LL ++++ +G++   L     D  Q + +N+YP C Q +  +GL  H+D                  +  GK W+ V+P+ GAF++N+GD   ++SNG +K+ +H+AVVN    RLS+A F +P     + PL     ++ I +  IT+ E  K  ++  L+
Sbjct:  127 DWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPLSVREGEKPILEAPITYTEMYKKKMSKDLE 333          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 62/216 (28.70%), Postives = 110/216 (50.93%), Query Frame = -2
Query:  202 LDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSV-----EDRAIYKNITHEEFIKLVVTSKLDGK 825
            LDW    FL   P  +      P +    R  + +++  L+K+   LL L+ +NLG+E G L  +F   +    G +++ YPPC + + + GL  H+D+                + K G+W+ V P+  + ++N+GD +E+++NG+YKS+ HR +   +  R+S+A+F++P  +  I P P  V     E +AIY     ++++KL    K   K
Sbjct:   84 LDWESTFFLRHLP--VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 62/217 (28.57%), Postives = 108/217 (49.77%), Query Frame = -2
Query:  202 LDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQ---GIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRA------IYKNITHEEFIKLVVTSKLDGK 825
            LDW    FL   P  +   S  P +    R  + +++  L+K+   LL L+ +NLG+E G L   F        G +++ YPPC + + + GL  H+D+                + K G+W+ V P+  + ++N+GD +E+++NG+YKS+ HR +   +  R+S+A+F++P  +  I P P  VE  A      +Y     ++++KL    K   K
Sbjct:   84 LDWESTFFLRHLP--VSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAK 298          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 62/216 (28.70%), Postives = 109/216 (50.46%), Query Frame = -2
Query:  202 LDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQ---GIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRA-----IYKNITHEEFIKLVVTSKLDGK 825
            +DW    FL   P  I   S  P +    R  + +++  L+K+   LL L+ +NLG+E G L + F        G +++ YPPC + + + GL  H+D+                + K G+W+ V P+  + ++N+GD +E+++NG+YKS+ HR +   +  R+S+A+F++P  +  I P P  VE  A     +Y     ++++KL    K   K
Sbjct:   84 MDWESTFFLKHLP--ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 66/203 (32.51%), Postives = 100/203 (49.26%), Query Frame = -2
Query:  283 IEGYGQAFVVSKDQKLDWGDMLFL-------LTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNS 870
            + GY  A       KL W + L             A+  +++L P      R   ++Y  E++++++ +++L+  +LG+E G     F D    +R NYYPPC +  R +G  PH D  A              +   G+W PV P+PGA +INIGD    +SNG YKS  HRAVVN  +ER S+A F  P  +  + P P++
Sbjct:  136 VSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRV-YQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVD-GEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSA 336          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 66/203 (32.51%), Postives = 100/203 (49.26%), Query Frame = -2
Query:  283 IEGYGQAFVVSKDQKLDWGDMLFL-------LTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNS 870
            + GY  A       KL W + L             A+  +++L P      R   ++Y  E++++++ +++L+  +LG+E G     F D    +R NYYPPC +  R +G  PH D  A              +   G+W PV P+PGA +INIGD    +SNG YKS  HRAVVN  +ER S+A F  P  +  + P P++
Sbjct:  136 VSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRV-YQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVD-GEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSA 336          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.538e-24
Identity = 61/207 (29.47%), Postives = 105/207 (50.72%), Query Frame = -2
Query:  208 DWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGK-WVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRAIY-KNITHEEFIKLVVTSKLD 822
            DW +++   + P   R  S WP  P    A  ++YS +L ++   LL ++++ +G+E   L     D  Q + +N+YP C + +  +GL  H+D                  K  GK W+ V+P+ GAF++N+GD    +SNG +K+ +H+AVVN    RLS+A F +P     + PL     +++I  + IT  E  +  ++  L+
Sbjct:  129 DWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLE 335          
The following BLAST results are available for this feature:
BLAST of CX054047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FLS_MALDO1.127e-2432.73Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCO_DIOKA1.127e-2428.841-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
FL3H_VITVI1.922e-2429.47Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_MALDO4.281e-2429.95Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO_TOBAC4.281e-2428.701-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO3_PETHY5.592e-2428.571-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY5.592e-2428.701-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
GAOX2_ORYSJ7.303e-2432.51Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI7.303e-2432.51Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FL3H_PETHY9.538e-2429.47Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H08-O16-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054047 ID=CX054047; Name=CX054047; organism=Citrus sinensis; type=EST; length=871bp
TTTTTTTTTTTTTTTTTGATGAATAGAAATTAGATTATGAGTAAAATCTT
TTCTTGCCATTGCACAACTCAGTAAGCAGACAAAAGCGCTTAGAGGTTTA
ATCTGTAACTGGCATTAGATGGCATAGCATTTTTAAGGGGCACACTCTTG
GTGAAATTCTCTGACCATTTATGGCTCAAGTCTCACATGACTCAATAGGT
TCTTACCATCAAGTTTGCTGGTTACAACGAGCTTTATAAATTCTTCGTGT
GTTATATTCTTGTAAATTGCTCTGTCCTCCACGGAATTTGGTAAAGGACC
AATAGTAGTATTCATGTTTGGACTGTGAAATGCTGCTACCGAAAGGCGTT
CCTTTTCTGGATTCACAACAGCTCTGTGCTCTATGCTCTTGTATTCTCCA
TTGCTCATTATCTCAATGATGTCTCCAATATTGATAATGAATGCACCTGG
GATTGGTTTGACTGGTACCCACTTGCCATATTTCTTTACCTGTAAACCTT
GTACTTGGTTCACTTGAACCAACAATGTTAATGCAACAGAGTCAGAGTGT
GGAGTGAGACCAATAACCCTGTTGGCCTGGGCACATGGTGGATAATAATT
CATTCTTATTCCTTGTATACCATCTTCAAACAAGCTTGCAAGTTTCCCAG
GTTCAATCCCCAAATTCTTAGCCATCAACTTCAACAGAAAGATTGTAACC
TTTTGCAGTTCCAAAGAGTATTCCTCTATGGTTGCTCTTAAAGAAGTAGG
GATGGTAGGCCAGAGACTCGTGGTTCTAATATTGGCAGGTTGAGTAAGAA
GAAAAAGCATGTCTCCCCAATCAAGCTTTTGATCCTTGGAGACAACGAAA
GCTTGCCCATAACCTTCAATG
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