CX054047

Overview
NameCX054047
Unique NameCX054047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.349e-22
Identity = 71/234 (30.34%), Postives = 112/234 (47.86%), Query Frame = -2
Query:  196 GYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSL--WPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGI-EPGKLASLFEDGIQG--IRMNYYPPCAQAN----RVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSV--EDRAIYKNITHEEFIKLVVTSKLDGKNL 864
            GYG   +   +  + W + L L T P  I   SL  +   P   RA +E Y   ++ +   +L+LMA+ LGI +   L+ L +D       R+N+YPPC +       ++G   H+D                     G WV V P   +F IN+GD +++M+NG +KS++HR + +  K RLS+  F  P ++  I PLP+ +   +  +YK  T  E+ K   TS+L    L
Sbjct:   91 GYGSKRI-GPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKGEECLYKEFTWCEYKKAAYTSRLADNRL 323          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.349e-22
Identity = 60/216 (27.78%), Postives = 107/216 (49.54%), Query Frame = -2
Query:  202 LDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQ---GIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRA-----IYKNITHEEFIKLVVTSKLDGK 825
            LDW    FL   P +    S  P +    R  + +++  L+K+   LL L+ +NLG+E G L + F        G +++ YPPC + + + GL  H+D+                + K  +W+ V P+  + ++N+GD +E+++NG+YKS+ HR +   +  R+S+A+F++P  +  I P    VE  A     +Y     ++++KL    K   K
Sbjct:   84 LDWESTFFLRHLPTS--NISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.007e-22
Identity = 65/205 (31.71%), Postives = 100/205 (48.78%), Query Frame = -2
Query:  274 IEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG------IRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVED 870
            IEGYG       + K  W D LF    P +      WP  P   R   EEY++ ++K++  LL +++  LG++   L    ++G+ G      +++NYYPPC + +  +G+  H+D ++              V K   W   + IP A I++IGD I  +SNG YK++ HR  V+ EK R+S   F  P     +GPLP    D
Sbjct:  112 IEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDAL----KEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTD-LSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGD 311          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = -2
Query:  238 TSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG----IRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRAIYKNITHEEF 747
            T+L +T+E+++ E + +   L +++A+    + G+ +S F++        +RMN YPPC + + V GL PH+DS                +K   +W+ VKP P A IINIGD+ +  SNG YKS+EHR + NP+ ER S A F  P+ +  I        DR  Y+N +  EF
Sbjct:  149 TTLSSTMEKFASESEALAYMLAEVLAE----KSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKD-NRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVI----ECSSDRPAYRNFSFREF 313          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 66/228 (28.95%), Postives = 114/228 (50.00%), Query Frame = -2
Query:  211 GYGQAFVVSKDQKLDWGDMLFLLTQP--ANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPC---AQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSV--EDRAIYKNITHEEFIKLVVTSKL 864
            GYG   +   +  + W + L L   P  ++ +T++++   P   R ++EEY  E+++V+  +L+++A+ LGIEP    S     E     +R+N+YP     A+    +G   H+D                   K G WV V P   +F IN+GD +++M+NG +KS++HR + +  + R+S+  F  P ++  I PLP  V  +D  +YK  T  ++      SKL
Sbjct:   95 GYGNKRI-GPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVPEQDDWLYKEFTWSQYKSSAYKSKL 321          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 67/220 (30.45%), Postives = 104/220 (47.27%), Query Frame = -2
Query:  181 WGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG----IRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPN--SVEDRAIYKNITHEEFIKLVVTSKLDGK-NLLSHVR 819
            W D L L        + + WP  P  LR  IE+++ + + V   LL+L+ + +GI+    A  FE  + G    + +N+YP C   ++ +G  PH D                   K G W+ V P P AF++N G  +E+++NG  KSIEHRA+ N    R SVA F  P     IGP     S E+   Y+     +F+++    KL    NL ++++
Sbjct:  119 WRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQ----ADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYK-GDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKENPPCYRTTMFRDFMRIYNVVKLGSSLNLTTNLK 333          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 64/224 (28.57%), Postives = 109/224 (48.66%), Query Frame = -2
Query:  229 IEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGI--EPGKLASLFED-----GIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVA-AFHSPNMNTTIGPLP--NSVEDRAIYKNITHEEFIKL 870
            + GYG+  +    +K  W +   +          +LWP   T     I+EY  E++K+   LL  +  +LG+  E  + A   E      G   IR+N+YP C +  R +GL  H+DS                 ++   WV V+P PG  ++NIGD+  I+SNG+  S+ HRA VN  + R+S+A  +  P  +  I P+       + ++Y++IT +E++++
Sbjct:  113 VSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQI 336          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.523e-21
Identity = 67/238 (28.15%), Postives = 116/238 (48.74%), Query Frame = -2
Query:  196 GYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTI---PTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEP-GKLASLFEDGIQG--IRMNYYPPCAQANR-------VIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSV--EDRAIYKNITHEEFIKLVVTSKLDGKNL 864
            GYG +  + ++  + W + L L+    +  +  L+P++   P + R  +EEY+  ++K+T  +L+ +   LGI+P   L+ L  D      +R+N+YPPC  +N+       VIG   H+D                     G W+ V P   +F  N+GD +++M+NG +KS+ HR + N +K R+S+  F  P++   I PL   +  ED  +Y+  T  E+      S+L    L
Sbjct:   81 GYGNS-KIGRNGDVGWVEYL-LMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEYKNSTYNSRLSDNRL 316          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.523e-21
Identity = 64/220 (29.09%), Postives = 114/220 (51.82%), Query Frame = -2
Query:  220 IEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGI-RMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLP--NSVEDRAIYKNITHEEFIKLVVT 870
            +EGYG+   +   ++    D ++L T P +      WP  P   R   EEY+  ++ ++  +++ +++ LG+  G+ A    +G   +  +N+YPP   ++   GL PH+D +               V K   W+ V+ IP A I+NIGD I ++SNG+YK++ H+  V+ EK R+S     SP  +  +GPLP   S +D   +K I +++++   +T
Sbjct:   69 VEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGL--GREAIKEVNGCWYVMNINHYPPYPHSDSFNGLEPHTD-INGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDYVHNKIT 285          
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.989e-21
Identity = 63/196 (32.14%), Postives = 96/196 (48.98%), Query Frame = -2
Query:  238 WGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPN--SVEDRAIYKNITHEEF 819
            W D+L LL  P     T  WP  P  LR  +  Y+   + V + +L+L+ + LG+ P         G   + +NYYPP    +R +GL PH D                   K G W+ V+P+P + +IN G  +E+++NG  K++EHRA  N  + RLSVA+F  P  +  +GP     S ++   Y+ +T  EF
Sbjct:  119 WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYK-GGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDNPPRYRTLTVGEF 312          
The following BLAST results are available for this feature:
BLAST of CX054047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G2OX_PHACN2.349e-2230.34Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
ACCO1_SOLLC2.349e-2227.781-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
FLS1_ARATH4.007e-2231.71Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
G2OX8_ARATH6.835e-2235.06Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX2_ARATH6.835e-2228.95Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
IDS3_HORVU1.166e-2130.452'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
G3OX4_ARATH1.166e-2128.57Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G2OX1_ARATH1.523e-2128.15Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FLS_MATIN1.523e-2129.09Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
IDS2_HORVU1.989e-2132.14Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H08-O16-1-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054047 ID=CX054047; Name=CX054047; organism=Citrus sinensis; type=EST; length=871bp
TTTTTTTTTTTTTTTTTGATGAATAGAAATTAGATTATGAGTAAAATCTT
TTCTTGCCATTGCACAACTCAGTAAGCAGACAAAAGCGCTTAGAGGTTTA
ATCTGTAACTGGCATTAGATGGCATAGCATTTTTAAGGGGCACACTCTTG
GTGAAATTCTCTGACCATTTATGGCTCAAGTCTCACATGACTCAATAGGT
TCTTACCATCAAGTTTGCTGGTTACAACGAGCTTTATAAATTCTTCGTGT
GTTATATTCTTGTAAATTGCTCTGTCCTCCACGGAATTTGGTAAAGGACC
AATAGTAGTATTCATGTTTGGACTGTGAAATGCTGCTACCGAAAGGCGTT
CCTTTTCTGGATTCACAACAGCTCTGTGCTCTATGCTCTTGTATTCTCCA
TTGCTCATTATCTCAATGATGTCTCCAATATTGATAATGAATGCACCTGG
GATTGGTTTGACTGGTACCCACTTGCCATATTTCTTTACCTGTAAACCTT
GTACTTGGTTCACTTGAACCAACAATGTTAATGCAACAGAGTCAGAGTGT
GGAGTGAGACCAATAACCCTGTTGGCCTGGGCACATGGTGGATAATAATT
CATTCTTATTCCTTGTATACCATCTTCAAACAAGCTTGCAAGTTTCCCAG
GTTCAATCCCCAAATTCTTAGCCATCAACTTCAACAGAAAGATTGTAACC
TTTTGCAGTTCCAAAGAGTATTCCTCTATGGTTGCTCTTAAAGAAGTAGG
GATGGTAGGCCAGAGACTCGTGGTTCTAATATTGGCAGGTTGAGTAAGAA
GAAAAAGCATGTCTCCCCAATCAAGCTTTTGATCCTTGGAGACAACGAAA
GCTTGCCCATAACCTTCAATG
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