CX054047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.597e-21 Identity = 64/226 (28.32%), Postives = 103/226 (45.58%), Query Frame = -2 Query: 220 GYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFED-------GIQG-IRMNYYPPCAQANRVIGLTPHSDS---VAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRAIYKNITHEEFIKLVVT 864 GYG + KL W + ++ T LWP +EEY + ++ L+ ++ +LG+ L L D IQ +++N YP C + +GL PH+DS ++ +W+ V+PI G+ ++ +GD+ I+SNG+++S HRAVVN R+S A F P N IGPL + IY+ + EE++ T Sbjct: 113 GYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSAAYFAGPPKNLQIGPLTSDKNHPPIYRRLIWEEYLAAKAT 338
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.392e-21 Identity = 60/218 (27.52%), Postives = 107/218 (49.08%), Query Frame = -2 Query: 202 LDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPE-KERLSVAAFHSPNMNTTIGPLPNSV------EDRAIYKNITHEEFIKLVVTSKLDGK 825 +DW FL P + S + + ++E++ +L+ + LL L+ +NLG+E G L F + G +++ YPPC + + + GL H+D+ + K G W+ V P+ A ++N+GD +E+++NG YKS+ HR + R+S+A+F++P + I P P V E + +Y E+++KL + K K Sbjct: 84 MDWESTFFLRHLPES--NISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDYMKLYLGVKFQAK 299
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.870e-21 Identity = 57/215 (26.51%), Postives = 105/215 (48.84%), Query Frame = -2 Query: 202 QKLDWGDMLFLLTQPANIRTTSLW--PTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRAIYKNITHEEFIKLVVTSKLDGK 831 + +DW +L P + +L+ P + R ++++ L+ + LL L+ +NLG+E G L +F + G +++ YP C + + GL H+D+ + K G W+ V P+ + +IN+GD +E+++NG YKS+ HR V E R+S+A+F++P + I P + Y + ++++KL K K Sbjct: 85 EDVDWESTFYLRHLPQS----NLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKETEYPSFVFDDYMKLYAGVKFQPK 295
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20 Identity = 69/243 (28.40%), Postives = 118/243 (48.56%), Query Frame = -2 Query: 178 GYGQAFVVSKDQKLDWGDMLFLLTQPANIRTT--SLWPTIPTSLR---ATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLAS------LFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYG--KWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDR-AIYKNITHEEFIKLVVTSKLDGKNLLSHVRL 864 GYG + S K W + PAN+R+ LWP R A +EE+ E++ + LL+L LG+ ++A+ + E + +N+YP C R +GL H+DS + ++G +WV V +PGA ++N+GD+ +I++NG + S+ HRAVVN E +R+S+ F P + + PL ++ A Y+ +T E++ + + G + L V + Sbjct: 115 GYGSPPISSFFSKCMWSEGYTF--SPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDS-GFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAI 354
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.872e-20 Identity = 67/234 (28.63%), Postives = 111/234 (47.44%), Query Frame = -2 Query: 178 YGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD-SVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNT---TIGPLPN--SVEDRAIYKNITHEEFIKLVVTSKLDGKNLLSHVRL 861 Y F + +W D L T P R L P + + EYS E+ K+ L +L+++ LG+ L + + +YYPPC Q + +GLT HSD S +Y WV V P+PGA ++N+GD++++++N ++ S+EHR + N R+SVA F S + GP+ S E+ Y++ T E+ K + DG + L ++++ Sbjct: 138 YSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDL----PATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQY--WVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20 Identity = 68/243 (27.98%), Postives = 118/243 (48.56%), Query Frame = -2 Query: 178 GYGQAFVVSKDQKLDWGDMLFLLTQPANIRTT--SLWPTIPTSLR---ATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLAS------LFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYG--KWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDR-AIYKNITHEEFIKLVVTSKLDGKNLLSHVRL 864 GYG + S K W + PAN+R+ LWP R A +EE+ E++ + LL+L LG+ ++A+ + E + +N+YP C R +GL H+DS + ++G +WV V +PGA ++N+GD+ +I++NG + S+ HRAVVN + +R+S+ F P + + PL ++ A Y+ +T E++ + + G + L V + Sbjct: 115 GYGSPPISSFFSKCMWSEGYTF--SPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDS-GFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAI 354
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20 Identity = 68/243 (27.98%), Postives = 118/243 (48.56%), Query Frame = -2 Query: 178 GYGQAFVVSKDQKLDWGDMLFLLTQPANIRTT--SLWPTIPTSLR---ATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLAS------LFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYG--KWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDR-AIYKNITHEEFIKLVVTSKLDGKNLLSHVRL 864 GYG + S K W + PAN+R+ LWP R A +EE+ E++ + LL+L LG+ ++A+ + E + +N+YP C R +GL H+DS + ++G +WV V +PGA ++N+GD+ +I++NG + S+ HRAVVN + +R+S+ F P + + PL ++ A Y+ +T E++ + + G + L V + Sbjct: 115 GYGSPPISSFFSKCMWSEGYTF--SPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDS-GFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREALAGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAI 354
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.431e-19 Identity = 59/198 (29.80%), Postives = 89/198 (44.95%), Query Frame = -2 Query: 295 GYGQAFVVSKDQKLDWGDML-FLLTQPANIRTTSLWPTIPTSLRATIE-------EYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGP 864 GY +FV KL W + L F + I + ++ + + E EY+ + +++ +++L+ +LG+E FED R+NYYP C Q +G PH D + KW + P P AF++NIGD ++NG YKS HRAVVN E+ER + A F P + P Sbjct: 133 GYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVD-NKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKP 329
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.431e-19 Identity = 59/204 (28.92%), Postives = 99/204 (48.53%), Query Frame = -2 Query: 268 GYGQAFVVSKDQKLDWGDMLFLLTQPAN--IRTTSLWPTIPTSLRATIEEYSL---ELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRA 864 GY +F KL W + L + P++ + + T+ R E Y+ E+ ++++ +++++ ++LG+ FE +R+NYYPPC + +G PH D + + G+W ++P AF++NIGD +SNG YKS HRAVVN + R S+A F P M+ + P P ++ D A Sbjct: 114 GYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTE-GRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAP-PGTLVDAA 315
BLAST of CX054047 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.147e-19 Identity = 59/204 (28.92%), Postives = 98/204 (48.04%), Query Frame = -2 Query: 268 GYGQAFVVSKDQKLDWGDMLFLLTQPAN--IRTTSLWPTIPTSLRATIEEYSL---ELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXVKKYGKWVPVKPIPGAFIINIGDIIEIMSNGEYKSIEHRAVVNPEKERLSVAAFHSPNMNTTIGPLPNSVEDRA 864 GY +F KL W + L + P++ + + T+ R E Y+ E+ ++++ +++++ ++LG+ FE +R+NYYPPC + +G PH D + + G+W ++P AF++NIGD +SNG YKS HRAVVN R S+A F P M+ + P P ++ D A Sbjct: 114 GYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTE-GRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAP-PGTLVDAA 315 The following BLAST results are available for this feature:
BLAST of CX054047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX054047 ID=CX054047; Name=CX054047; organism=Citrus sinensis; type=EST; length=871bpback to top |