CX054029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30 Identity = 73/134 (54.48%), Postives = 84/134 (62.69%), Query Frame = -3 Query: 393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794 S+RKN + +K EG +VKVSMDGAPYLRK+DL +YK Y EL +L MF F++G F E GSD+VPTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSE GL Sbjct: 71 SYRKNNVQTKKSESEGQGN----------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEY-------FEREG-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30 Identity = 76/134 (56.72%), Postives = 85/134 (63.43%), Query Frame = -3 Query: 393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794 S+RKN + QK EE + N +VKVSM GAPYLRK+DLK+YKSY EL AL MF K E + NGS+Y PTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSEA GL Sbjct: 79 SYRKNNVQ-QKKEEESEG--------NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF-------------KCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGL 190
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.000e-29 Identity = 74/134 (55.22%), Postives = 86/134 (64.18%), Query Frame = -3 Query: 393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794 SFRKN + QK E+GD ++KVSM GAPYLRK+DLK+YKSY EL AL +F T G + + NGS+Y PTYEDKDGDWMLVGDVPW+MFV SCKRLRI+KGSEA GL Sbjct: 89 SFRKNSLQ-QKKVEQGDGTGM--------YLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKC-TFGEYSER------------EGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29 Identity = 70/134 (52.24%), Postives = 86/134 (64.18%), Query Frame = -3 Query: 393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794 S+RKN + +K+ E + + +VKVSMDGAPYLRK+DL YK Y EL AL MF F++G + D GSD+VPTYEDKDGDWML+GDVPW+MF+ +CKRLRIMKGSEA GL Sbjct: 73 SYRKNNIQSKKNESEHEGQGI--------YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFER------------DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29 Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = -3 Query: 402 VQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA 770 V+ + + +NK NV++VKVSMDGAPYLRK+DLK+YK+Y EL AL MF FT+G +G K GS +VPTYEDKDGDWMLVGDVPWDMF SC++LRIMKGSEA Sbjct: 62 VRSNRKNNNNK-------NVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.228e-29 Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = -3 Query: 384 VKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 704 VKV++DGAPYLRKVDL + Y L AL MF+S G G + +KL+DL+ G++YVPTYEDKDGDWMLVGDVPW MFV+SCKR+R+MK SEA+ L+PR Sbjct: 86 VKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGE---GTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29 Identity = 66/108 (61.11%), Postives = 74/108 (68.52%), Query Frame = -3 Query: 393 NVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 716 +V++VKVSMDGAPYLRK+DLK YK+Y EL AL MF C +G K GS +VPTYEDKDGDWMLVGDVPWDMF SCKRLRIMKGS+A L Sbjct: 76 SVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.965e-29 Identity = 77/135 (57.04%), Postives = 84/135 (62.22%), Query Frame = -3 Query: 393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794 S+RKN +VQ+ +G FVKVSMDGAPYLRKVDLK+Y Y EL AL MF IG +G K GS+Y PTYEDKDGDWMLVGDVPWDMFV SCKRLRIMKGSEA GL Sbjct: 86 SYRKN--SVQEGEGDG------------IFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK-LAIGEYSEREGYK-------------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.106e-28 Identity = 68/106 (64.15%), Postives = 74/106 (69.81%), Query Frame = -3 Query: 393 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 707 FVKVSMDGAPYLRK+DL++Y Y EL AL MF TIG +G K GS+Y PTYEDKDGDWMLVGDVPWDMFV SCKRLRIMKG+EA GL Sbjct: 94 FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFK-LTIGEYSEREGYK-------------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.306e-26 Identity = 62/105 (59.05%), Postives = 73/105 (69.52%), Query Frame = -3 Query: 393 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 707 FVKVSMDGAPYLRK+DLK+YK Y+EL +AL MF F+ G + N SD+ TYEDKDGD MLVGDVP++MF+ +CKRLRIMKGSEA GL Sbjct: 101 FVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAV-------------NPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192 The following BLAST results are available for this feature:
BLAST of CX054029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX054029 ID=CX054029; Name=CX054029; organism=Citrus sinensis; type=EST; length=796bpback to top |