CX054029

Overview
NameCX054029
Unique NameCX054029
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30
Identity = 73/134 (54.48%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794
            S+RKN +  +K   EG             +VKVSMDGAPYLRK+DL +YK Y EL  +L  MF  F++G         F  E        GSD+VPTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSE  GL
Sbjct:   71 SYRKNNVQTKKSESEGQGN----------YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK-FSVGEY-------FEREG-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22D_PHAAU (Auxin-induced protein 22D OS=Phaseolus aureus GN=AUX22D PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30
Identity = 76/134 (56.72%), Postives = 85/134 (63.43%), Query Frame = -3
Query:  393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794
            S+RKN +  QK  EE +         N  +VKVSM GAPYLRK+DLK+YKSY EL  AL  MF             K    E    +  NGS+Y PTYEDKDGDWMLVGDVPW+MFV SCKRLRIMKGSEA GL
Sbjct:   79 SYRKNNVQ-QKKEEESEG--------NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF-------------KCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIMKGSEAKGL 190          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.000e-29
Identity = 74/134 (55.22%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794
            SFRKN +  QK  E+GD            ++KVSM GAPYLRK+DLK+YKSY EL  AL  +F   T G    +            +  NGS+Y PTYEDKDGDWMLVGDVPW+MFV SCKRLRI+KGSEA GL
Sbjct:   89 SFRKNSLQ-QKKVEQGDGTGM--------YLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKC-TFGEYSER------------EGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 70/134 (52.24%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794
            S+RKN +  +K+  E + +          +VKVSMDGAPYLRK+DL  YK Y EL  AL  MF  F++G    +            D   GSD+VPTYEDKDGDWML+GDVPW+MF+ +CKRLRIMKGSEA GL
Sbjct:   73 SYRKNNIQSKKNESEHEGQGI--------YVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFER------------DGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = -3
Query:  402 VQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA 770
            V+ + +  +NK       NV++VKVSMDGAPYLRK+DLK+YK+Y EL  AL  MF  FT+G     +G K             GS +VPTYEDKDGDWMLVGDVPWDMF  SC++LRIMKGSEA
Sbjct:   62 VRSNRKNNNNK-------NVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.228e-29
Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = -3
Query:  384 VKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 704
            VKV++DGAPYLRKVDL  +  Y  L  AL  MF+S      G  G  +    +KL+DL+ G++YVPTYEDKDGDWMLVGDVPW MFV+SCKR+R+MK SEA+ L+PR
Sbjct:   86 VKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGE---GTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29
Identity = 66/108 (61.11%), Postives = 74/108 (68.52%), Query Frame = -3
Query:  393 NVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 716
            +V++VKVSMDGAPYLRK+DLK YK+Y EL  AL  MF       C  +G K             GS +VPTYEDKDGDWMLVGDVPWDMF  SCKRLRIMKGS+A  L
Sbjct:   76 SVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYK-------------GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.965e-29
Identity = 77/135 (57.04%), Postives = 84/135 (62.22%), Query Frame = -3
Query:  393 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 794
            S+RKN  +VQ+   +G             FVKVSMDGAPYLRKVDLK+Y  Y EL  AL  MF    IG     +G K             GS+Y PTYEDKDGDWMLVGDVPWDMFV SCKRLRIMKGSEA GL
Sbjct:   86 SYRKN--SVQEGEGDG------------IFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK-LAIGEYSEREGYK-------------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.106e-28
Identity = 68/106 (64.15%), Postives = 74/106 (69.81%), Query Frame = -3
Query:  393 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGS-QGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 707
            FVKVSMDGAPYLRK+DL++Y  Y EL  AL  MF   TIG     +G K             GS+Y PTYEDKDGDWMLVGDVPWDMFV SCKRLRIMKG+EA GL
Sbjct:   94 FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFK-LTIGEYSEREGYK-------------GSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185          
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA31_ORYSJ (Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica GN=IAA31 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.306e-26
Identity = 62/105 (59.05%), Postives = 73/105 (69.52%), Query Frame = -3
Query:  393 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL 707
            FVKVSMDGAPYLRK+DLK+YK Y+EL +AL  MF  F+ G      +             N SD+  TYEDKDGD MLVGDVP++MF+ +CKRLRIMKGSEA GL
Sbjct:  101 FVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAAV-------------NPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192          
The following BLAST results are available for this feature:
BLAST of CX054029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IAA4_ARATH2.016e-3054.48Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]
AX22D_PHAAU2.016e-3056.72Auxin-induced protein 22D OS=Phaseolus aureus GN=A... [more]
AX22E_PHAAU1.000e-2955.22Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
IAA3_ARATH1.706e-2952.24Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
IAA1_ARATH1.706e-2956.45Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA23_ORYSJ2.228e-2959.81Auxin-responsive protein IAA23 OS=Oryza sativa sub... [more]
IAA2_ARATH3.801e-2961.11Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
AX22B_PHAAU4.965e-2957.04Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA4_PEA1.106e-2864.15Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA... [more]
IAA31_ORYSJ2.306e-2659.05Auxin-responsive protein IAA31 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9G09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9G09-M18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054029 ID=CX054029; Name=CX054029; organism=Citrus sinensis; type=EST; length=796bp
TTTTAAAATAAATAATAAGATATTATTATTATTATTGGACAAGTCATAGA
CAATAAACTCAAGTTACAGAAGTGGGAAGTTGGAGACTTATAAACATGTT
CTAAGAATATTAATTATTGCTTCTTGTCACTAAACAAATCTCTCTCAGAA
TATATTCCAACTCTCTACTAATTACTAACATTTTAAAAACAAAAACCCAA
AAAAGAGAAAAGAAAAAAAAAAACGCATGATACATAAGCACATCCAAACT
CTCCCTGCTTGATTCCTCAACAAGCCGGTTTGCCCTTTTGGTTTTGAAAT
CAGCTTTTTTAACAAGCTGCTTTTGGCAAAAAGTTGCTGATCATAATCAA
TCTTCAGCTTCTGTTCTTGCACTTCTCAACTGCCCTTGGTGCAAGTCCAA
TGGCCTCGGATCCTTTCATTATTCTTAAGCGTTTGCATGAATCAACAAAC
ATATCCCATGGTACATCACCAACAAGCATCCAATCTCCATCTTTGTCTTC
ATAAGTAGGTACATAATCTGAGCCATTCAAAAGATCAATCAGTTTGCTCT
CATTCATAAAATCCTTCATCCCTTGAGACCCACAGTTACCAATGGTGAAA
GAGCTGAACATTTTGCCAAGGGCATCAGAGAGTTCTTGGTAGCTTTTGTA
TAGCTTCAAGTCAACCTTGCGCAAGTATGGGGCACCATCCATGCTCACTT
TAACAAAAGCTACATTGCTGCTGCTGCTGCTGCTAGCCTTATTATCACCT
TCTTCATTGTCCTTTTGGACGGCCATGATGTTCTTTCTGAATGATC
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