CX054029
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.710e-26 Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = -3 Query: 384 VQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 770 VQKD EEG+ K +VKV+MDG RKVDL ++SY+ L+ AL MF+ +IG C S N KL+D N ++Y TYED+DGDWMLVGDVPW+MFV S KRLRIM+ S+A GL R Sbjct: 149 VQKDKEEGEKKGRV-----AGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT----NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.710e-26 Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = -3 Query: 384 VQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPR 770 VQKD EEG+ K +VKV+MDG RKVDL ++SY+ L+ AL MF+ +IG C S N KL+D N ++Y TYED+DGDWMLVGDVPW+MFV S KRLRIM+ S+A GL R Sbjct: 149 VQKDKEEGEKKGRV-----AGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNT----NSLKLLD--NSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.952e-25 Identity = 60/110 (54.55%), Postives = 78/110 (70.91%), Query Frame = -3 Query: 384 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA--IGLAPR 707 +VKVSMDGAP+LRK+DL L+K Y +L+ AL K+F G GM + + + + S++VP YEDKDGDWMLVGDVPW+MF++SCKRLRIMK S+A GL P+ Sbjct: 88 YVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLF--------GCYGMVEALKNA------DNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPK 183
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.680e-25 Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = -3 Query: 396 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCG-SQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIG 707 ++KVSMDGAPYLRK+DL L+K Y EL+ AL K+F CG + +KD N ++VP YEDKDGDWMLVGDVPW+MF++SCKRLRIMK S+A G Sbjct: 77 YMKVSMDGAPYLRKIDLCLHKGYLELALALEKLFDC-----CGIEEALKDAEN----------CEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 166
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.653e-24 Identity = 57/104 (54.81%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 396 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIG 707 +VKVSMDGAP+LRK+DL ++K Y +L+ AL K F + I + +KD N +++VP YEDKDGDWMLVGDVPW+MF +SCKRLRIMK S+A G Sbjct: 81 YVKVSMDGAPFLRKIDLAMHKGYSDLAFALDKFFGCYGI----CEALKDAEN----------AEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: AX22A_PHAAU (Auxin-induced protein 22A OS=Phaseolus aureus GN=AUX22A PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.809e-24 Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = -3 Query: 384 FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA--IGLAPR 707 +VKVSMDGAP+LRK+DL ++K Y +L+ AL K+F G GM + + + ++VP YEDKDGDWMLVGDVPW+MF++SCKRLRIMK ++A GL P+ Sbjct: 87 YVKVSMDGAPFLRKMDLGMHKGYSDLAFALEKLF--------GCYGMVEALKN------VENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRADAKGFGLQPK 182
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.071e-23 Identity = 61/131 (46.56%), Postives = 77/131 (58.78%), Query Frame = -3 Query: 402 SFRKNIMAVQKDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEA 794 +F + A + GD K +VKVSMDGAPYLRKVDLK+ K Y+EL +AL +F+ C S D ++ + + YEDKDGD MLVGDVPW+MF+ SCK+LRIMKGSEA Sbjct: 102 TFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTK-----CFSATASDGCSDGQ---------FAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.399e-23 Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = -3 Query: 375 AFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGL-APRAVE 710 + VKVSMDGAPYLRK+DL++YK Y+EL +AL MF F S D N S++ TY+DKDGD MLVGDVP+DMF +CK+LRIMK SEA GL +PR ++ Sbjct: 129 SLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF----------------SGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.827e-23 Identity = 62/130 (47.69%), Postives = 76/130 (58.46%), Query Frame = -3 Query: 375 KDNEEGDNKAXXXXXSNVAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVE 764 KD+E D V F+KV+MDG RKVDL + SY+ L+ L MF G G F +L+D S++V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GLA R E Sbjct: 112 KDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ--FTKPLRLLD--GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 237
BLAST of CX054029 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.386e-23 Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = -3 Query: 372 VAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESKLIDLLNGS-DYVPTYEDKDGDWMLVGDVPWDMFVDSCKRLRIMKGSEAIGLAPRAVEK 713 + FVKV+MDG RKVD++ + SY+ L+ L +MF T C + K + LL+GS D+V TYEDK+GDWMLVGDVPW MF++S KRLRIM SEA GLAPR E+ Sbjct: 124 LGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTC--------REKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQ 230 The following BLAST results are available for this feature:
BLAST of CX054029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX054029 ID=CX054029; Name=CX054029; organism=Citrus sinensis; type=EST; length=796bpback to top |