EY693218

Overview
NameEY693218
Unique NameEY693218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length323
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.607e-22
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFI+DEMRK+SAE+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  340 MSSACVLFIMDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPISA 394          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.564e-22
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.564e-22
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.564e-22
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.564e-22
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFILDEMRKK AEE  ATTGEGL+WGVLFGFGPGLTVETVVL SVPIKA
Sbjct:  339 MSSACVLFILDEMRKKCAEEGMATTGEGLEWGVLFGFGPGLTVETVVLRSVPIKA 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.131e-21
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ +ATTGEG +WGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGRATTGEGFEWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 2.783e-21
Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 158
            MSSACVLFI+DEMRKKSAE+  ATTGEGLDWGVLFGFGPGLTVETVVLHS+P
Sbjct:  340 MSSACVLFIIDEMRKKSAEDGAATTGEGLDWGVLFGFGPGLTVETVVLHSLP 391          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.783e-21
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFI+DEMRK+SAE+   TTGEG+DWGVLFGFGPGLTVETVVLHSVP+ A
Sbjct:  340 MSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 394          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.783e-21
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMRK+SAE+ + TTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  341 MSSACVLFILDEMRKRSAEDGQTTTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.783e-21
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 167
            MSSACVLFI+DEMRK+SAE+   TTGEG+DWGVLFGFGPGLTVETVVLHSVP+ A
Sbjct:  338 MSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVPVTA 392          
The following BLAST results are available for this feature:
BLAST of EY693218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CHS1_HORVU5.607e-2287.27Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHS6_SORBI9.564e-2290.57Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS5_SORBI9.564e-2290.57Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS3_SORBI9.564e-2290.57Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=... [more]
CHS3_RUTGR9.564e-2290.91Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS2_SORBI2.131e-2188.68Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=... [more]
CHSY_CALCH2.783e-2190.38Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS2_SECCE2.783e-2183.64Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SORBI2.783e-2188.68Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHS1_SECCE2.783e-2183.64Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693218 ID=EY693218; Name=EY693218; organism=Citrus sinensis; type=EST; length=323bp
ACATGTCAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAG
TCTGCTGAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGT
GCTGTTCGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACA
GTGTCCCCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGT
TCAGTAACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGT
GTGAAGGTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCT
TAAAAAAAAAAAAAAAAAAAAAA
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