EY693218

Overview
NameEY693218
Unique NameEY693218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length323
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMR+KS EE   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRRKSKEEQLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRKKSAE+   T GEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  336 MSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 386          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMR+KSA++   TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  337 MSSACVLFILDEMRRKSAKDGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MS ACVLFILDEMR+KSAE+   TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  337 MSGACVLFILDEMRRKSAEKGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRK SA+E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRKASAKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.402e-19
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRK SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRKSSAKKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMR+KS E+   TTGEG++WGVLFGFGPGLTVETVVLHSV I
Sbjct:  337 MSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSVAI 389          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 158
            MSSACVLFILDEMRK S+ +   TTGEGL+WGVLFGFGPGLT+ETVVLHSVP
Sbjct:  336 MSSACVLFILDEMRKASSNDGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVP 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19
Identity = 43/52 (82.69%), Postives = 47/52 (90.38%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 158
            MSSACVLFILDEMRK S+ +   TTGEGL+WGVLFGFGPGLT+ETVVLHSVP
Sbjct:  336 MSSACVLFILDEMRKASSNDGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVP 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.802e-19
Identity = 44/51 (86.27%), Postives = 48/51 (94.12%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDE+R+KSAE+   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  180 MSSACVLFILDEVRRKSAEKGLETTGEGLEWGVLFGFGPGLTVETVVLHSV 230          
The following BLAST results are available for this feature:
BLAST of EY693218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CHSB_PEA2.605e-1988.24Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS1_CITSI2.605e-1988.24Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHS1_CICAR2.605e-1983.02Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHSY_PHAVU3.402e-1983.02Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSA_PETHY3.402e-1988.24Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS2_CAMSI3.402e-1988.24Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSY_HYPAN4.443e-1983.02Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSD_IPONI4.443e-1982.69Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHS3_IPOBA4.443e-1982.69Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_MALDO5.802e-1986.27Chalcone synthase (Fragment) OS=Malus domestica GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693218 ID=EY693218; Name=EY693218; organism=Citrus sinensis; type=EST; length=323bp
ACATGTCAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAG
TCTGCTGAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGT
GCTGTTCGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACA
GTGTCCCCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGT
TCAGTAACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGT
GTGAAGGTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCT
TAAAAAAAAAAAAAAAAAAAAAA
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