EY693218

Overview
NameEY693218
Unique NameEY693218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length323
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.897e-19
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 158
            MSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSVP
Sbjct:  336 MSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVP 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.897e-19
Identity = 44/51 (86.27%), Postives = 46/51 (90.20%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRK S +E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRKASTKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMR+KSAE    TTGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct:  337 MSSACVLFILDEMRRKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 155
            MSSACVLFILDEMRK S  E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  337 MSSACVLFILDEMRKASTNEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 164
            MSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSV IK
Sbjct:  336 MSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVLIK 389          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILD+MRKKS E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  336 MSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILDEMR+KS +    TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  337 MSSACVLFILDEMRRKSIQNGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of EY693218 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18
Identity = 44/53 (83.02%), Postives = 46/53 (86.79%), Query Frame = 3
Query:    3 MSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 161
            MSSACVLFILD+MRKKS E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  336 MSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
The following BLAST results are available for this feature:
BLAST of EY693218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
CHS8_IPOBA9.897e-1982.69Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS1_SOLLC9.897e-1986.27Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_PUELO1.293e-1883.02Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSE_IPOPU1.293e-1886.27Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI1.293e-1886.27Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSA_SOLTU1.293e-1886.27Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS6_IPOBA1.293e-1881.48Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS5_SOYBN1.293e-1883.02Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS5_PEA1.293e-1881.13Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_SOYBN1.293e-1883.02Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-C02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693218 ID=EY693218; Name=EY693218; organism=Citrus sinensis; type=EST; length=323bp
ACATGTCAAGCGCTTGTGTCCTGTTCATCCTTGACGAGATGAGAAAGAAG
TCTGCTGAGGAAGCGAAAGCCACCACCGGCGAAGGGCTAGATTGGGGTGT
GCTGTTCGGGTTCGGGCCGGGGCTCACCGTCGAGACCGTTGTGCTGCACA
GTGTCCCCATCAAAGCTTGAAGTGAGAACTCCATCAGTATGTTTAGTAGT
TCAGTAACTTTATGTTGTATGCTTTCACTCTTGAATTATTGGTTGATCGT
GTGAAGGTTTAGTTTTGTCAATTGAATTTAAGGCATCGTACCTTTTCTCT
TAAAAAAAAAAAAAAAAAAAAAA
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