DR403688

Overview
NameDR403688
Unique NameDR403688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28
Identity = 69/160 (43.12%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  232 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYF-SVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGD----LVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGN-AVPVWYNMVKQGLIQDPVFSFWLNHN 693
            L +Y +AQYYG + IGTPPQ F V+FDTGSSNLWVP  NC F  +AC  H              G S  IQYGTG++ G    D V  G        K+Q    AT EPG+TF+ AKFDGI G+G+  ISV   + P+        + ++ +F+FWL+ +
Sbjct:   61 LSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRD 220          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 66/162 (40.74%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  214 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNHNQQ 699
            D     L+NY+D  Y G I IGTPPQ+F V+ DTGS++LWVPS  C  S AC  H             +G   +I YG+G ++GF +YD+V++  LV   Q F  + +EPG     A FDGILGL +  +S     PV+ N+  QGLI   +F+F+L+  ++
Sbjct:   60 DVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYCS-SPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVFDNLWAQGLISQNLFAFYLSSKEE 220          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 1
Query:  172 VKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNHN 693
            ++K+G   +L  S     + L NY+D  Y G I IGTPPQ F+VIFDT SS+LWVPS  C+ S AC  H             +  +  +   +G ++G   YD+V++G    ++Q F  +  EP      A FDG+LGLG+  +++    PV+ N+ KQG I +PVF+ +L+ N
Sbjct:   49 IQKFGLKGSLC-SPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH-SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLSTN 220          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 76/163 (46.63%), Postives = 87/163 (53.37%), Query Frame = 1
Query:  205 DSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNHN 693
            DS  T +VAL N  D  Y+GEIGIGTPPQKFTVIFDTGSS LWVPS+  +                                   + + S DS        K+Q+FIEAT E    F+   FDGILGL FQ IS    VPVWYNMV QGL++   FSFWLN N
Sbjct:    1 DSGST-VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKAH-----------------------------------SMYESSDS-----STYKEQDFIEATEEADNVFLNRLFDGILGLSFQTIS----VPVWYNMVNQGLVKR--FSFWLNRN 116          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 72/157 (45.86%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  223 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNHN 693
            +VAL N  D  Y+GEIGIGTPPQKFTVIFDTGSS LWVPS+  +                                        Y+S   G    K+Q+FIEAT E    F+   FDGILGL FQ IS    VPVWYNM+ QGL++   FSFWLN N
Sbjct:    6 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAH--------------------------------------SMYES--SGSSTYKEQDFIEATDETDNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKR--FSFWLNRN 116          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 63/162 (38.89%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  232 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSV--ACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVA----KFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNHNQQ 699
            L+N MD  Y G I IGTPPQ+F V+FDTGSS+L VPS NC       C                  ++  I +G+G + GF ++D+V++GDLV  DQ F       G+ F+ +     FDGILGL + +IS   A+P++  +  +G   +PVF+F+LN ++Q
Sbjct:   63 LRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPF-------GLIFLESWLDIPFDGILGLNYPKISFSGAIPIFDKLKNEGAFSEPVFAFYLNKDKQ 217          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.990e-24
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 1
Query:  232 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNHNQQ 699
            L+N  D  Y G I IGTPPQ+F V+FDT SS+LWVPS  C  S AC  H               ++  I YG+G + G   +D+V++G+LV  DQ F  +  E G  F    +DG+LGL +  IS   A+P++  +  Q  I +PVF+F+L+ +++
Sbjct:   63 LRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFC-TSPACSTHVRFRHLQSSTFRLTNKTFRITYGSGRMKGVVVHDTVRIGNLVSTDQPFGLSIEEYG--FEGRIYDGVLGLNYPNISFSGAIPIFDKLKNQRAISEPVFAFYLSKDER 215          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  220 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV--TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWL 684
            D V L +  +  YYGE  IG   QKF  IFDTGS+NLWVPS  C  ++ C                +G    + Y +G ++GFFS D V + +L     +FIE T   G    + + +FDGI+GLG++++S+G+  PV   +  Q  I+  VF+F+L
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSF-PYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYL 281          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  220 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV--TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWL 684
            D V L +  +  YYGE  IG   QKF  IFDTGS+NLWVPS  C  ++ C                +G    + Y +G ++GFFS D V + +L     +FIE T   G    + + +FDGI+GLG++++S+G+  PV   +  Q  I+  VF+F+L
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSF-PYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYL 281          
BLAST of DR403688 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21
Identity = 57/159 (35.85%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  232 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVA------KFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNH 690
            + ++ D +Y G I IGTP Q F V+ DTGSSNLW+P   C     C                NG+S +IQYG+G  AG    D+V+ G     D +    T   G+   ++        DGILGL F  ++V   VP   N + QG++  P+FS WL H
Sbjct:   63 VNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC--KTNCKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFG--AKGDSQLSVPTTTFGIASKISADFKNDATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVWLEH 217          
The following BLAST results are available for this feature:
BLAST of DR403688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
ASP3_CAEEL1.173e-2843.13Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPAF_RABIT4.458e-2840.74Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PAG1_PIG1.434e-2637.36Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
CARDG_CYNCA7.117e-2646.63Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDH_CYNCA1.586e-2545.86Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PAG1_SHEEP2.071e-2538.89Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
PAG1_BOVIN2.990e-2439.10Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
PLM1_PLAFA6.235e-2236.94Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF76.235e-2236.94Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
ASP6_CAEEL5.278e-2135.85Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241P11 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241P11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403688 ID=DR403688; Name=DR403688; organism=Citrus sinensis; type=EST; length=700bp
GGGAGAGCAGTACCGTTGTCTTTGTTCCTCTCAAGCCTTTTGTTTTCTCT
GGTGGCTTCTGTGTCCAATGATGGATTGGTTAGAATAGGGCTGAAAAAGA
TGAAATTGGATCCCAACAACCGGCTTGCTGCCCGGCTGGAGTCCGAGCAT
GGCGAGGCATTGAGAGCTTCTGTTAAGAAATACGGATTTCCTAATAATCT
CCGAGACTCTGAGGATACTGATATTGTTGCATTGAAAAACTATATGGATG
CTCAGTACTACGGCGAGATTGGTATTGGTACTCCTCCACAGAAGTTCACT
GTAATCTTTGACACAGGTAGCTCTAATTTGTGGGTGCCTTCAACTAACTG
TTATTTCTCGGTTGCTTGTTACTTTCATTCCAAGTACAAGTCAAGCCAAT
CCAGTACATACAAGAAGAATGGTGAATCTGCTTCTATTCAGTATGGTACT
GGAGCTATTGCTGGTTTCTTTAGTTATGACAGTGTCAAAGTTGGTGACCT
GGTTGTCAAAGATCAGGAATTTATTGAGGCAACCAGGGAGCCTGGTGTCA
CATTTATGGTGGCCAAGTTTGATGGCATATTAGGACTTGGGTTTCAAGAG
ATTTCAGTTGGAAATGCTGTCCCAGTTTGGTACAACATGGTCAAACAAGG
CCTAATTCAGGATCCAGTTTTTTCATTTTGGCTTAACCACAATCAACAGG
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