DR403685

Overview
NameDR403685
Unique NameDR403685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.632e-38
Identity = 51/70 (72.86%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERY 232
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+FS +G+L+E+ + S M + LERY
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERY 70          

HSP 2 Score: 70.0922 bits (170), Expect = 4.632e-38
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  304 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546
            E  KLKAR E LQR+++  +GE+L  LN KEL++LE QL  +LK IRS + Q M ++++ LQ +++ L E N  L +++ E
Sbjct:   94 ENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.025e-37
Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 2
Query:   23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERY 232
            MGRG+VE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFS  G+LYEF S+  + +T+ERY
Sbjct:    1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SNVGVGRTIERY 69          

HSP 2 Score: 74.3294 bits (181), Expect = 1.025e-37
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 1
Query:  298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL----MEGYQVNTLQLNP 579
            +QE  KLK +YE+L R+ RNL+GE+L  ++ KEL++LERQL+ +L   R  +TQ M++ + EL+ KE+ L + N  LK        +G+Q   L LNP
Sbjct:   89 RQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ--DLLLNP 184          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.334e-37
Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = 2
Query:   14 EKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            ++K GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG LYE+ S++S+  T+ERY+ A  ++ N
Sbjct:   14 QRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAISDNSN 94          

HSP 2 Score: 63.1586 bits (152), Expect = 1.334e-37
Identity = 36/114 (31.58%), Postives = 63/114 (55.26%), Query Frame = 1
Query:  298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDSF 636
            QQE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +LD S+ +IRS + + +   +  +Q +E  L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:  107 QQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPF 220          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.264e-37
Identity = 55/81 (67.90%), Postives = 69/81 (85.19%), Query Frame = 2
Query:   17 KKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            +K GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG LYE+ S++S+  T+ERY+ A  ++ N
Sbjct:   15 RKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNSVKGTIERYKKAISDNSN 94          

HSP 2 Score: 63.1586 bits (152), Expect = 2.264e-37
Identity = 35/114 (30.70%), Postives = 63/114 (55.26%), Query Frame = 1
Query:  298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDSF 636
            QQE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +L+ S+ +IRS + + +   +  +Q +E  L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:  107 QQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPF 220          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.265e-37
Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 2
Query:   17 KKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            KK+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG LYE+ +++S+  T+ERY+ A  +  N
Sbjct:   14 KKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-ANNSVRGTIERYKKACSDAVN 93          

HSP 2 Score: 64.6994 bits (156), Expect = 2.265e-37
Identity = 37/115 (32.17%), Postives = 65/115 (56.52%), Query Frame = 1
Query:  238 CNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPS 582
            C+     P+V+  EA     QQE  KL+ +   +Q S R+++GE LG LN KEL++LE +L+  + ++RS + + ++  +  +Q +E  L   N  L+ ++ EG ++N  Q   S
Sbjct:   88 CSDAVNPPSVT--EANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESS 200          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.525e-37
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 2
Query:   14 EKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            ++K+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG LYE+ +++S+  T+ERY+ A  +  N
Sbjct:   14 QRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-ANNSVKGTIERYKKACTDSPN 94          

HSP 2 Score: 62.3882 bits (150), Expect = 6.525e-37
Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  259 PNVSA-REALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNT-LQLNPSAEDCGYGLKPAQP-QGDSFLHALECEPTLQIGYQPADPISVV 705
            PN S+  EA     QQE  KL+    ++Q++ RN++GE LG L  ++L+ LE +L+  + +IRS + + +   +  +Q KE  L   N+ L+ ++ E  +    + L P + D  Y L P Q   G +++     +P      Q    + +V
Sbjct:   93 PNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSD--YELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTALQLV 242          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.107e-36
Identity = 54/82 (65.85%), Postives = 70/82 (85.37%), Query Frame = 2
Query:   14 EKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            ++K+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG LYE+ +++S+  T+ERY+ A  +  N
Sbjct:   14 QRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKATIERYKKACSDSSN 94          

HSP 2 Score: 60.4622 bits (145), Expect = 1.107e-36
Identity = 37/122 (30.33%), Postives = 63/122 (51.64%), Query Frame = 1
Query:  268 SAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDS 633
            S  EA     QQE  KL+A+   LQ   RN LGE L  LN ++L +LE++++  + +IR+ + + +   +  +Q +E  L   N+ L+ ++ E  +   + L P +    Y L P Q   D+
Sbjct:   97 SIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQMNLMPGSS--SYDLVPPQQSFDA 216          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 7.046e-36
Identity = 54/82 (65.85%), Postives = 70/82 (85.37%), Query Frame = 2
Query:   14 EKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            ++K+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVAL++FSNRG LYE+ +++S+  T+ERY+ A  +  N
Sbjct:   14 QRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEY-ANNSVKATIERYKKACSDSSN 94          

HSP 2 Score: 56.225 bits (134), Expect = 7.046e-36
Identity = 36/126 (28.57%), Postives = 64/126 (50.79%), Query Frame = 1
Query:  268 SAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME----GYQVNTLQLNPSAEDCGYGLKPAQPQGDS 633
            S  EA     QQE  KL+A+   L    RN++GE L  +  KEL++LE++++  + +IRS + + +   +  +Q +E  L   N+ L+ ++ E     +Q   + L P +    + L P   Q D+
Sbjct:   97 SVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDT 222          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.178e-36
Identity = 54/82 (65.85%), Postives = 70/82 (85.37%), Query Frame = 2
Query:   14 EKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            ++K+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG LYE+ +++S+  T+ERY+ A  +  N
Sbjct:   14 QRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKATIERYKKACSDSSN 94          

HSP 2 Score: 57.3806 bits (137), Expect = 9.178e-36
Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = 1
Query:  268 SAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME----GYQVNTLQLNPSAEDCGYGLKPAQPQGDS 633
            S  EA     QQE  KL+A+   LQ   RN+LGE L  L+ ++L++LE++++  + +IRS + + +   +  +Q +E  L   N+ L+ ++ E      Q    Q+N       Y L P   Q D+
Sbjct:   97 SISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDT 222          
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.608e-35
Identity = 55/81 (67.90%), Postives = 68/81 (83.95%), Query Frame = 2
Query:   17 KKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259
            KK+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG LYE+ +++S+  T+ERY+ A  +  N
Sbjct:   14 KKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-ANNSVRGTIERYKKACSDAVN 93          

HSP 2 Score: 56.6102 bits (135), Expect = 7.608e-35
Identity = 32/103 (31.07%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  238 CNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546
            C+     P ++  EA     QQE  KL+ +   +Q   R++LGE LG LN KEL++LE +L+  + ++RS + + ++  +  +Q +E  L   N  L+ ++ E
Sbjct:   88 CSDAVNPPTIT--EANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITE 188          
The following BLAST results are available for this feature:
BLAST of DR403685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
AGL8_SOLCO4.632e-3872.86Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL13_ARATH1.025e-3774.29Agamous-like MADS-box protein AGL13 OS=Arabidopsis... [more]
AG_BRANA1.334e-3767.07Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AG_ARATH2.264e-3767.90Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]
AGL1_ARATH2.265e-3767.90Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AG_PANGI6.525e-3765.85Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
AG_PETHY1.107e-3665.85Floral homeotic protein AGAMOUS OS=Petunia hybrida... [more]
AG_SOLLC7.046e-3665.85Floral homeotic protein AGAMOUS OS=Solanum lycoper... [more]
AG_TOBAC9.178e-3665.85Floral homeotic protein AGAMOUS OS=Nicotiana tabac... [more]
AGL5_ARATH7.608e-3567.90Agamous-like MADS-box protein AGL5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241P06 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241P06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403685 ID=DR403685; Name=DR403685; organism=Citrus sinensis; type=EST; length=764bp
GGGGGAAAGAAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGTTGAAGA
GGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAAAT
GGCCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAGGT
TGCTCTCATCATTTTCTCCAATAGAGGAGAGCTGTACGAGTTTTGCAGTA
GTTCAAGCATGGTCAAAACGCTTGAGAGGTACAGAAGTGCAACTATGGAG
CACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAGCCAG
CAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGATCCCA
AAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAGCTTG
AGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATCAACA
AGAACTCAGTACATGCTGGATACCCTTACTGAACTGCAACATAAGGAACA
GTTGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAGGGAT
ACCAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTAT
GGGCTTAAACCAGCTCAACCTCAGGGCGATAGCTTCCTTCACGCCTTGGA
ATGTGAACCCACACTGCAAATTGGATACCAGCCTGCGGACCCAATATCGG
TTGTCACAGCAGGCCCGAGTCTGAATAATTACATGCAAGGATGGCTACCA
TGCTAAGAGAGCGG
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