DR403685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 4.657e-31 Identity = 41/71 (57.75%), Postives = 61/71 (85.92%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSS-SSMVKTLERY 232 MGRG+V+++RIEN+++RQVTF+KRR GLLKKA+E++VLCD +VA I+FS +G L+ + SS ++M + LE+Y Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKY 71 HSP 2 Score: 65.855 bits (159), Expect = 4.657e-31 Identity = 52/158 (32.91%), Postives = 76/158 (48.10%), Query Frame = 1 Query: 283 LELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFLHALECEPTLQIGYQPADPISVVTA---GPSLNNYMQGWL 747 LE S +++KL+ R EAL++SQRNL+G+EL L ++++ LE Q+D SL IRS KE+LL E N L++++ E + TL A PA D+F+ P L I + VTA S NN + W+ Sbjct: 90 LEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRS--------------RKEKLLMEKNTILEKKITE---LETLHTCIRASPTKAAAPPACNTADAFV------PNLNICCGDSGEPETVTAPLGWTSSNNGLPWWM 224
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 6.061e-31 Identity = 44/78 (56.41%), Postives = 61/78 (78.21%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQ 256 MGRG++ ++RI+N +RQVTF+KRRNG+ KKA EL++LCDAEV L+IFS+ G LYE+ SS+SM ++RY + E Q Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY-SSTSMKSVIDRYGKSKDEQQ 77 HSP 2 Score: 62.7734 bits (151), Expect = 6.061e-31 Identity = 30/81 (37.04%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 540 Q+E L+ + LQ + R L+GE+L LN KEL+SLE QL++SL+ +R+ + ++D + EL K L+ + N L +++ Sbjct: 90 QREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKI 170
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 6.068e-31 Identity = 47/83 (56.63%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNRMCP 271 MGRG++ +++I++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFSN +LY+F +SSS+ T+ER+ +A ME Q M P Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDF-ASSSVKSTIERFNTAKMEEQELMNP 82 HSP 2 Score: 58.151 bits (139), Expect = 6.068e-31 Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 561 Q+E L+ +LQ + R L G EL L+ KEL+++E QL+MSL+ IR R Q + + + EL K L+ N L +++ +Q N Sbjct: 90 QREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQEN 177
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.340e-30 Identity = 45/83 (54.22%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNRMCP 271 MGRG++ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ G+LY+F +SSSM ++RY + +E Q + P Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-ASSSMKSVIDRYNKSKIEQQQLLNP 82 HSP 2 Score: 59.3066 bits (142), Expect = 1.340e-30 Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 561 Q+E L+ ALQ + R ++GE+L L+ EL SLE Q+++SL+ IR + Q + + EL K L+ + N L +++ +Q N Sbjct: 90 QREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQEN 177
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.272e-30 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNRMCP 271 MGRG++ +KRI+N +NRQVTF+KRR GL+KKA EL++LCDA+V LI+FS G LY+F SSSSM +ERY+ A EH + P Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF-SSSSMKSIIERYQEAGEEHCRLLNP 82 HSP 2 Score: 53.9138 bits (128), Expect = 2.272e-30 Identity = 26/88 (29.55%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVN 561 Q+E L+ + + L + R LLGEE+ ++L+ L+ Q++MSL IR+ + Q + + + +L K L+ + N L+++ +Q N Sbjct: 90 QREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNIAHQRN 177
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.746e-29 Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNRMCPQ 274 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG L+EF SSS M KTLERYRS Q+ P+ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPE 84 HSP 2 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 232 QKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLN------PSAEDCGYGLKPAQPQGDSFLHALECEPTLQIGY 678 + CNY + + E + QEYLKLK R E LQ +QRN+LGE+LGPL+ KELE LE Q+++SLKQIRS + Q +LD L +L+ KEQ L + NK L+++L E N L ++ S +P QG H + + +LQIGY Sbjct: 71 RSCNYNSQDAAAPENEI----NYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGY 221
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.746e-29 Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNRMCPQ 274 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG L+EF SSS M KTLERYRS Q+ P+ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPE 84 HSP 2 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 232 QKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLN------PSAEDCGYGLKPAQPQGDSFLHALECEPTLQIGY 678 + CNY + + E + QEYLKLK R E LQ +QRN+LGE+LGPL+ KELE LE Q+++SLKQIRS + Q +LD L +L+ KEQ L + NK L+++L E N L ++ S +P QG H + + +LQIGY Sbjct: 71 RSCNYNSQDAAAPENEI----NYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGY 221
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.189e-28 Identity = 46/76 (60.53%), Postives = 62/76 (81.58%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATME 250 MGRG++ ++RI+N +RQVTF+KRRNGLLKKA ELS+LCDAEV L++FS+ G LYEF SS++M ++RY +A E Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF-SSTNMKTVIDRYTNAKEE 75 HSP 2 Score: 51.2174 bits (121), Expect = 1.189e-28 Identity = 27/81 (33.33%), Postives = 45/81 (55.56%), Query Frame = 1 Query: 298 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 540 Q+E L+ + LQ S + L+GEEL L ++L+ LE +L++SL+ IR + + + EL K L+ + N L + L Sbjct: 89 QREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL 169
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.630e-28 Identity = 44/79 (55.70%), Postives = 63/79 (79.75%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259 M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS G+LY+ ++ +M + +ERY+SA+ E N Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQAN 79 HSP 2 Score: 49.6766 bits (117), Expect = 2.630e-28 Identity = 27/87 (31.03%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 289 LSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++++E Sbjct: 86 MDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.630e-28 Identity = 44/79 (55.70%), Postives = 63/79 (79.75%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259 M RG+V+L+RIEN ++RQVTF KRR GLLKKA ELS+LC+A++ +IIFS G+LY+ ++ +M + +ERY+SA+ E N Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYKSASGEQAN 79 HSP 2 Score: 49.6766 bits (117), Expect = 2.630e-28 Identity = 27/87 (31.03%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 289 LSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++++E Sbjct: 86 MDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172 The following BLAST results are available for this feature:
BLAST of DR403685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403685 ID=DR403685; Name=DR403685; organism=Citrus sinensis; type=EST; length=764bpback to top |