DR403685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.432e-28 Identity = 43/72 (59.72%), Postives = 60/72 (83.33%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRS 238 M RG+V+++RIEN ++RQVTF KRR GLLKKA ELSVLCDA+V +IIFS++G+L+E ++ +M +ERY+S Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQS 72 HSP 2 Score: 53.9138 bits (128), Expect = 3.432e-28 Identity = 31/100 (31.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 247 GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 G EP R+ + ++Q L+ + LQR R+ G G + +L +LE+ L++ + QIR+T+ Q M + L++KE +L EAN+ L++++ E Sbjct: 77 GQMEPGALQRQQV---AEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKE 173
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 4.439e-28 Identity = 48/70 (68.57%), Postives = 61/70 (87.14%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERY 232 MGRG++E+KRIEN +RQVTF+KRR+GLLKKA ELSVLCDAEVA+I+FS G+L+E+ SS+ M +TL RY Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY-SSTGMKQTLSRY 69 HSP 2 Score: 48.9062 bits (115), Expect = 4.439e-28 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 316 LKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 LK + LQ L G+ L PL KEL+SLE+QL +L +R + + + + L E + KEQ N+TL++++ E Sbjct: 90 LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQE 166
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.440e-28 Identity = 51/70 (72.86%), Postives = 62/70 (88.57%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERY 232 MGRG++E+KRIEN +RQVTF+KRR GLLKKA+ELSVLCDAEVA+I+FS G+L+EF SS+SM KTL RY Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF-SSTSMKKTLLRY 69 HSP 2 Score: 45.4394 bits (106), Expect = 4.440e-28 Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 1 Query: 316 LKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 LK LQ ++ G+ L L+ KEL+ LE+QL+ SL +R + + L E + KEQ N+TL++++ E Sbjct: 97 LKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLRRQVQE 173
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.834e-28 Identity = 77/146 (52.74%), Postives = 96/146 (65.75%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQ--NRMCPQGRPWS*VASKNI*SLKHDMKPYRDPKGISLEKNLAL*TAKSLSHLKGSLICH*SRSDQQE 454 MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG+LYEF S+ + KTLERY+ Q N + + W SK LK + + + L ++L + K L L+ L C S++ Q++ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMSK----LKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 141 HSP 2 Score: 110.153 bits (274), Expect = 1.320e-23 Identity = 74/184 (40.22%), Postives = 106/184 (57.61%), Query Frame = 1 Query: 232 QKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL-MEGYQVNTLQLNPSAEDCG----YGLKPAQPQGDSFLHALECEPTLQIGYQ----PADPISV---VTAGPSLNNYMQGWL 747 Q C Y A + N + E S E KLKA++EALQR+QR+LLGE+LGPL+ KEL+ LE+QL+ +L Q R +TQ M++ + EL+ KE+ L E N+ LK +L +EG N + ++ G G QP S A++ EPTLQIGY PA+ ++ + NN+M GW+ Sbjct: 70 QHCCYNAQDSNNALSETQ--SWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHS--AAMDSEPTLQIGYPHQFVPAEANTIQRSTAPAGAENNFMLGWV 249
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.911e-25 Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLER 229 M R ++++K+I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ G+L+++ SSSSM + LER Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILER 68 HSP 2 Score: 51.6026 bits (122), Expect = 1.911e-25 Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 1 Query: 283 LELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 L+L Y +L R + GEEL LN +EL+ LER L+ L ++ + ++ + +LQ K L E N+ L+Q++ME Sbjct: 86 LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVME 173
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.493e-25 Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERY 232 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDA+VALIIFS+ G+L+EFC SSSM + LER+ Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC-SSSMKEVLERH 69 HSP 2 Score: 47.3654 bits (111), Expect = 2.493e-25 Identity = 24/85 (28.24%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 283 LELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 537 L+L ++ ++ R + GEEL L+ +EL+ LE+ L+ L ++ T++ ++ ++ELQ K L + NK L+Q+ Sbjct: 86 LQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQ 170
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.060e-24 Identity = 45/73 (61.64%), Postives = 64/73 (87.67%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCS-SSSMVKTLERYRS 238 MGRG++E+KRIEN NRQVTF+KRR+G+LKKA E+SVLCDAEV ++IFS+ G+LY++CS +S+ + LE+Y++ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQT 73 HSP 2 Score: 33.8834 bits (76), Expect = 2.060e-24 Identity = 27/107 (25.23%), Postives = 46/107 (42.99%), Query Frame = 1 Query: 292 SSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKP 612 S E ++K + +Q R+L GE+L L KEL +E LD + + ++D +++L + NK L +L + + L+ S D G P Sbjct: 86 SLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDK----LMDHWERHVRTDKMLEDENKLLAFKLHQ----QDIALSGSMRDLELGYHP 184
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24 Identity = 54/79 (68.35%), Postives = 67/79 (84.81%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQN 259 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG LYE+ +++S+ T+ERY+ A + N Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVKSTVERYKKANSDTSN 78
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYR----------SATMEHQNRMCPQGR 280 MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +G+LYE+ + S M K LERY SA E + C + R Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYR 96 HSP 2 Score: 83.1889 bits (204), Expect = 1.728e-15 Identity = 43/94 (45.74%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 265 VSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 546 +SA E + EY KLKA+ E +Q+ ++L+GE+L LN KEL+ LE+QL+ SLK I S ++ ML++++ELQ KE+ L E NK L++ L+E Sbjct: 81 ISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.694e-23 Identity = 42/75 (56.00%), Postives = 63/75 (84.00%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCS-SSSMVKTLERYRSAT 244 MGRG++E+KRIEN NRQVT++KRRNG++KKA E++VLCDA+V+LIIF N G+++E+CS S+++ L+ Y+ + Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTS 75 HSP 2 Score: 36.5798 bits (83), Expect = 1.694e-23 Identity = 23/76 (30.26%), Postives = 40/76 (52.63%), Query Frame = 1 Query: 313 KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 540 ++K + +Q R+L GE++ LN KEL LE L L I + ++ + L ++ +Q+L E +K L+ L Sbjct: 93 RIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS----EILRMVRKNDQILEEEHKQLQYAL 164 The following BLAST results are available for this feature:
BLAST of DR403685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403685 ID=DR403685; Name=DR403685; organism=Citrus sinensis; type=EST; length=764bpback to top |