DR403685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.666e-16 Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTL-ERY----RSATMEHQNR 262 MG+G++E+KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++G+L++FCS ++ L RY R+ ++ NR Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNR 85
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.548e-16 Identity = 37/67 (55.22%), Postives = 56/67 (83.58%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTL 223 M RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ +L+E+ S ++ K + Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEI 67
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15 Identity = 40/80 (50.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15 Identity = 40/80 (50.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15 Identity = 40/80 (50.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15 Identity = 40/80 (50.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15 Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSS--SMVKTLERYRSAT 244 MGRGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS G+LY F S + S+ + +ERY + T Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATT 76
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.948e-15 Identity = 40/80 (50.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.948e-15 Identity = 40/80 (50.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79
BLAST of DR403685 vs. ExPASy Swiss-Prot
Match: MEF2C_MOUSE (Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.948e-15 Identity = 40/80 (50.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 23 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGELYEFCSSSSMVKTLERYRSATMEHQNR 262 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ +L+++ +S+ M K L +Y H++R Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESR 79 The following BLAST results are available for this feature:
BLAST of DR403685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403685 ID=DR403685; Name=DR403685; organism=Citrus sinensis; type=EST; length=764bpback to top |