DR403674

Overview
NameDR403674
Unique NameDR403674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.222e-17
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  220 SVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAA-LLNNKEDYRK 627
            S  +R+ KE+ ++           F     I    GT  G  GT YEG  + + +  P++YPFKPP+++F+T  +HPN+    G ICLDIL++ WS     ++ L+S+Q+LL  P P  P ++  A   L ++E + K
Sbjct:    2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNK 139          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 1
Query:  232 RLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 579
            RL+KEL  L +     G++ + E + +      I GG  T YE   + L +  P  YPF+PPQV+F T  +HPN+D  G ICLDIL    +  W  + +  T+L SIQ L+ EPNP+ PL
Sbjct:    6 RLKKELHMLAIEPPP-GITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPL 124          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
The following BLAST results are available for this feature:
BLAST of DR403674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBC1_YEAST2.222e-1734.06Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharo... [more]
UBE2T_MOUSE2.902e-1740.83Ubiquitin-conjugating enzyme E2 T OS=Mus musculus ... [more]
UBC9_XENTR2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK2.902e-1741.67SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE2.902e-1741.67SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241O17 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403674 ID=DR403674; Name=DR403674; organism=Citrus sinensis; type=EST; length=730bp
CGCCGGGGGAAACCAAACAAAATTACAAAAANNNAANNNNGAATCATCTC
ATCGTCATCGTTAATCTTGATTATCGTCATTGATCATCGGCCGTTGATCA
GTGATTCTTCTTTGCTGATCATGGAGGTGCGGCCAAATCCGACGGTTGAA
AATTTACGTGCAACTGCCGCTGCTTCGTCGAAGCAGCCTGTCTCTTCTCC
TAACACCGTCGATAGAACATCCGTTACTCAAAGGCTTCAGAAGGAATTGA
TGTCTCTTATGATGAGTGGAGGTGATCTTGGGGTCTCGGCCTTTCCTGAA
GGCGAGAGCATTTTCACTTGGATTGGCACAATTGAGGGTGGAAAGGGAAC
TATGTATGAGGGTTTATCATACAAACTTTCTTTGCATTTTCCTCTGGATT
ATCCTTTCAAGCCACCCCAAGTCAAGTTTGAAACTATGTGCTTCCATCCA
AATGTCGATCAGTATGGCAACATATGCCTAGACATCCTTCAGGACAAGTG
GTCTTCAGCTTATGATTGCAGAACGATTCTTTTGTCCATTCAAAGTTTAT
TGGGAGAGCCTAATCCAGAGAGCCCTCTCAACAGCTATGCTGCAGCTCTG
TTGAACAATAAGGAAGATTACAGAAAAATGGTCCAGAAACAGTACTTTGC
TGGAGAATTTGAGAGCTAATTTGAACAGCAAAACAGATACAAAATCGGAT
GTTAGGCTTCCACATTATTTCTCTGTAAAG
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