DR403674

Overview
NameDR403674
Unique NameDR403674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  295 PEGE-SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            P+G  ++  W   I G KGT +EG  +KL + F  DYP  PP+ KFE   FHPNV   G +CL IL++   W  A   + ILL IQ LL EPN + P  + A  +   N+ +Y K V+ Q
Sbjct:   32 PDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC9_DICDI (Sumo-conjugating enzyme ubc9 OS=Dictyostelium discoideum GN=ubc9 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 48/115 (41.74%), Postives = 64/115 (55.65%), Query Frame = 1
Query:  307 SIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDK--WSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQKQ 642
            +++ W   I G   T +EG  Y L + F  DYP KPP+ +F    FHPNV   G +CL IL ++  W  +   +T+LL IQ LL  PNP+SP       L L NKE+Y K V+ Q
Sbjct:   37 NLYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQ 151          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  304 ESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-QDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQ 636
            +++F W  T  G   ++Y G  +  SL FPLDYPF+PP ++F T  +HPN D  GN+CL IL Q  +  +   R++L  I  LL EPNP+ PL  S A    N++  + K+ +
Sbjct:   34 DNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIAR 146          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC1_MIMIV (Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba polyphaga mimivirus GN=UBC PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17
Identity = 46/113 (40.71%), Postives = 72/113 (63.72%), Query Frame = 1
Query:  304 ESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQ 636
            E+IF W   I+G + ++YE  +++L +    DYP+  P+VKF T   H NV+  G+ICL+IL +D W+++ +  +I+ SI  LL +PNPE P NS  A+L  N+K  Y K ++
Sbjct:   34 ENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKVKFITPIQHMNVNDKGDICLNILKKDGWNASLNIISIIWSIIVLLDQPNPEDPFNSELASLYRNDKLSYDKKIR 146          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  223 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 621
            V +++ KE+ +L     + G+   P  E I     +IEG +GT Y G  +++ L    D+P  PP+  F T  FHPNV   G IC+++L+  W +    R +LL+I+ LL  PNPES LN  A   LL N E+Y
Sbjct:   12 VIRQVYKEVSTLTPDPPE-GIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  325 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 594
            G I G   T YEG  Y+L +  P  YPF PP+V+F T  +HPN+    G ICLDIL+D+W++A   RT+LLS+Q+LL    P+ P ++  A
Sbjct:   41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  325 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 594
            G I G   T YEG  Y+L +  P  YPF PP+V+F T  +HPN+    G ICLDIL+D+W++A   RT+LLS+Q+LL    P+ P ++  A
Sbjct:   41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 42/91 (46.15%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  325 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA 594
            G I G   T YEG  Y+L +  P  YPF PP+V+F T  +HPN+    G ICLDIL+D+W++A   RT+LLS+Q+LL    P+ P ++  A
Sbjct:   41 GEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVA 131          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 1
Query:  325 GTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 645
            G I G   T YEG  + L +  P  YPF PP+V+F T  +HPN+    G ICLDIL+D W++A   RT+LLS+Q+LL    P+ P ++  A    +K D   +  K +
Sbjct:   41 GEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHW 148          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.443e-17
Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 1
Query:  232 RLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 579
            RL++EL  L+      GV  +    ++      I GG G+ YEG  + L +  P  YPF+PP+++F T  +HPN+D  G ICLDIL    +  W  A +  T+L SIQ L+ EPNP+ PL
Sbjct:    6 RLKRELQ-LLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPL 124          
The following BLAST results are available for this feature:
BLAST of DR403674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBC9A_DANRE2.902e-1741.67SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]
UBC9_DICDI3.790e-1741.74Sumo-conjugating enzyme ubc9 OS=Dictyostelium disc... [more]
UBC14_SCHPO3.790e-1739.82Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccha... [more]
UBC1_MIMIV4.950e-1740.71Probable ubiquitin-conjugating enzyme E2 L460 OS=A... [more]
UBE2S_RANCA6.465e-1738.06Ubiquitin-conjugating enzyme E2 S OS=Rana catesbei... [more]
UBE2K_MOUSE6.465e-1746.15Ubiquitin-conjugating enzyme E2 K OS=Mus musculus ... [more]
UBE2K_HUMAN6.465e-1746.15Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens ... [more]
UBE2K_BOVIN6.465e-1746.15Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN... [more]
UBCD4_DROME6.465e-1740.74Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophi... [more]
UBE2T_XENLA8.443e-1740.00Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevi... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241O17 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403674 ID=DR403674; Name=DR403674; organism=Citrus sinensis; type=EST; length=730bp
CGCCGGGGGAAACCAAACAAAATTACAAAAANNNAANNNNGAATCATCTC
ATCGTCATCGTTAATCTTGATTATCGTCATTGATCATCGGCCGTTGATCA
GTGATTCTTCTTTGCTGATCATGGAGGTGCGGCCAAATCCGACGGTTGAA
AATTTACGTGCAACTGCCGCTGCTTCGTCGAAGCAGCCTGTCTCTTCTCC
TAACACCGTCGATAGAACATCCGTTACTCAAAGGCTTCAGAAGGAATTGA
TGTCTCTTATGATGAGTGGAGGTGATCTTGGGGTCTCGGCCTTTCCTGAA
GGCGAGAGCATTTTCACTTGGATTGGCACAATTGAGGGTGGAAAGGGAAC
TATGTATGAGGGTTTATCATACAAACTTTCTTTGCATTTTCCTCTGGATT
ATCCTTTCAAGCCACCCCAAGTCAAGTTTGAAACTATGTGCTTCCATCCA
AATGTCGATCAGTATGGCAACATATGCCTAGACATCCTTCAGGACAAGTG
GTCTTCAGCTTATGATTGCAGAACGATTCTTTTGTCCATTCAAAGTTTAT
TGGGAGAGCCTAATCCAGAGAGCCCTCTCAACAGCTATGCTGCAGCTCTG
TTGAACAATAAGGAAGATTACAGAAAAATGGTCCAGAAACAGTACTTTGC
TGGAGAATTTGAGAGCTAATTTGAACAGCAAAACAGATACAAAATCGGAT
GTTAGGCTTCCACATTATTTCTCTGTAAAG
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