DR403674

Overview
NameDR403674
Unique NameDR403674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.895e-25
Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  217 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 639
            TS  +RL ++    M +    GVSA P  +++ TW   I G   T +E  +++L +HF   YP KPP VKF +  FHPNV   G +CLDILQ++WS  YD   IL SIQSLL +PN  SP N  A+ L  +N+++Y K V++
Sbjct:    3 TSARRRLMRDFKR-MQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRE 143          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.895e-25
Identity = 62/142 (43.66%), Postives = 86/142 (60.56%), Query Frame = 1
Query:  217 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 639
            TS  +RL ++    M +    GVSA P  +++ TW   I G   T +E  +++L +HF   YP KPP VKF +  FHPNV   G +CLDILQ++WS  YD   IL SIQSLL +PN  SP N  A+ L  +N+++Y K V++
Sbjct:    3 TSARRRLMRDFKR-MQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRE 143          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 63/162 (38.89%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  169 AASSKQPVSSPNTVDRTS-----VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQ 636
            A    +P     T  R S       +R+QKEL  + +       SA P+G++++ W+ TI G  G++YEG  + L +HF  +YPFKPP+V F T  +H N++  G ICLDIL+D WS A     +LLSI SLL + NP  PL  S A   L N+E++ ++ +
Sbjct:   64 AGGGDEPRKEAKTTPRISRALGTSAKRIQKELAEITLDPPP-NCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIAR 224          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.938e-25
Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 1
Query:  217 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 639
            T+  +RL ++   L  S    G+S  P   +I  W   I G   +++EG ++KLSL F  +YP   P VKF +  FHPNV   G+ICLDILQ++WS  YD   IL SIQSLL +PNP SP NS +A L   NK +Y + V++
Sbjct:    3 TAARRRLMRDFKRLQ-SDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKE 143          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 1
Query:  229 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRKMVQK 639
            +R+QKEL  L         SA P G+ +F W  TI G   + Y+G  + L++HFP DYPFKPP+V F T  +HPN++  G+ICLDIL+ +WS A     +LLSI SLL +PNP+ PL    A     ++E Y ++ ++
Sbjct:    4 KRIQKELTDLQRDP-PAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLARE 140          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  229 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 627
            +R+QKEL  L         SA P G+ +F W  TI G   + Y+G  + L++HFP DYPFKPP++ F T  +HPN++  G+ICLDIL+ +WS A     +LLSI SLL +PNP+ PL    A    ++KE Y +
Sbjct:    4 KRIQKELSDLQRDP-PAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  229 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 627
            +R+QKEL  L         SA P G+ +F W  TI G   + Y+G  + L++HFP DYPFKPP++ F T  +HPN++  G+ICLDIL+ +WS A     +LLSI SLL +PNP+ PL    A    ++KE Y +
Sbjct:    4 KRIQKELSDLQRDP-PAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = 1
Query:  229 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL-NSYAAALLNNKEDYRK 627
            +R+QKEL  L         SA P G+ +F W  TI G   + Y+G  + L++HFP DYPFKPP++ F T  +HPN++  G+ICLDIL+ +WS A     +LLSI SLL +PNP+ PL    A    ++KE Y +
Sbjct:    4 KRIQKELSDLQRDP-PAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 61/140 (43.57%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  229 QRLQKELMSLMMSGGD--LGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALL-NNKEDYRKMVQK 639
            +R+QKEL  L   G D     SA P G+ +F W  TI G   + Y+G  + L++HFP DYPFKPP+V F T  +HPN++  G+ICLDIL+ +WS A     +LLSI SLL +PNP+ PL    A +   ++E Y ++ ++
Sbjct:    4 KRIQKELQDL---GRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLARE 140          
BLAST of DR403674 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = 1
Query:  229 QRLQKELMSLMMSGGD--LGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPL 579
            +R+ KEL  L   G D     SA P GE +F W  TI G   + Y G  + L++HFP DYPFKPP+V F T  +HPN++  G+ICLDIL+D+WS A     +LLSI S+L +PNP+ PL
Sbjct:    4 KRINKELTDL---GRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPL 119          
The following BLAST results are available for this feature:
BLAST of DR403674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBC2_EMENI2.895e-2543.66Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_ASPFU2.895e-2543.66Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBCD2_DROME3.781e-2538.89Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]
UBC2_DICDI4.938e-2544.37Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium... [more]
UB2D4_HUMAN6.450e-2542.75Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]
UB2D1_MOUSE6.450e-2544.03Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]
UB2D1_HUMAN6.450e-2544.03Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens... [more]
UB2D1_BOVIN6.450e-2544.03Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus G... [more]
UBC2_CAEEL8.424e-2543.57Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditi... [more]
UBC1_MAGGR8.424e-2548.74Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241O17 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403674 ID=DR403674; Name=DR403674; organism=Citrus sinensis; type=EST; length=730bp
CGCCGGGGGAAACCAAACAAAATTACAAAAANNNAANNNNGAATCATCTC
ATCGTCATCGTTAATCTTGATTATCGTCATTGATCATCGGCCGTTGATCA
GTGATTCTTCTTTGCTGATCATGGAGGTGCGGCCAAATCCGACGGTTGAA
AATTTACGTGCAACTGCCGCTGCTTCGTCGAAGCAGCCTGTCTCTTCTCC
TAACACCGTCGATAGAACATCCGTTACTCAAAGGCTTCAGAAGGAATTGA
TGTCTCTTATGATGAGTGGAGGTGATCTTGGGGTCTCGGCCTTTCCTGAA
GGCGAGAGCATTTTCACTTGGATTGGCACAATTGAGGGTGGAAAGGGAAC
TATGTATGAGGGTTTATCATACAAACTTTCTTTGCATTTTCCTCTGGATT
ATCCTTTCAAGCCACCCCAAGTCAAGTTTGAAACTATGTGCTTCCATCCA
AATGTCGATCAGTATGGCAACATATGCCTAGACATCCTTCAGGACAAGTG
GTCTTCAGCTTATGATTGCAGAACGATTCTTTTGTCCATTCAAAGTTTAT
TGGGAGAGCCTAATCCAGAGAGCCCTCTCAACAGCTATGCTGCAGCTCTG
TTGAACAATAAGGAAGATTACAGAAAAATGGTCCAGAAACAGTACTTTGC
TGGAGAATTTGAGAGCTAATTTGAACAGCAAAACAGATACAAAATCGGAT
GTTAGGCTTCCACATTATTTCTCTGTAAAG
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