EY720317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_VIBSL (Thymidylate synthase OS=Vibrio splendidus (strain LGP32) GN=thyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.662e-17 Identity = 62/213 (29.11%), Postives = 107/213 (50.23%), Query Frame = 3 Query: 42 WDGNASREYLDSVGLTD---REEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPEKK---DIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 WD N++ L+ L + + E D+G VYG Q R + A G DQL +++ + N +DR +L+ +NP + + L PC F + L QRS D+ LG+ FN+ + ++A + G H + +AH+Y + + P+ + QL++ P P INPE K D++++V+ +DF + GY+ H+ I+ +V Sbjct: 82 WDANSN---LNEAWLNNPYRKGEDDMGRVYGVQGRAW--------AKPDGGHIDQLKKIVDDLTNGIDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYVFLAIMAQITGKKAGVAYHKLVNAHIYEDQLAPMRDIQLKREPLAGPTFHINPEIKSLEDLETWVTMDDFWVEGYECHEAIKYPFSV 283
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_SHESH (Thymidylate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=thyA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.662e-17 Identity = 62/210 (29.52%), Postives = 102/210 (48.57%), Query Frame = 3 Query: 42 WDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPEKK---DIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 WD NA+ + + D+G VYG Q R + G DQL +++ +K +DR +LS +NP + + L PC F + L +QRS D+ LG+ FN L +IA + PG H I +AH+Y + + + + QL++ P L INP+ K D++++V+ +DF++ GY H+ I+ +V Sbjct: 82 WDANANENQVWLNNPHRKGVDDMGRVYGVQGRAWSKP--------DGGTVDQLKKIVDNLKAGVDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLYLNSFQRSCDVPLGLNFNQVQVYTLLALIAQITGKKPGMAYHKIVNAHIYEDQLALMRDVQLKREPFEPASLSINPDIKSLEDLETWVTMDDFEVSGYQHHEAIKYPFSV 283
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_SHEHH (Thymidylate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=thyA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16 Identity = 60/214 (28.04%), Postives = 102/214 (47.66%), Query Frame = 3 Query: 30 DIHIWDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPEKK---DIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 D W N R+ +D D+G VYG Q R + G DQL +++ + +DR +LS +NP + + L PC F + L +QRS D+ LG+ FN L ++A + G H I +AH+Y + + + + Q+++ P P L INP+ K D++++V+ +DF++ GY+ H+ I+ +V Sbjct: 88 DNQAWLNNPHRKGVD----------DMGRVYGVQGRAWSKP--------DGGTIDQLRKIVDDLSKGIDDRGEILSFYNPGEFHMGCLRPCMHTHNFSLLGDTLHLTSFQRSCDVPLGLNFNQVQVFTLLALMAQITGHKAGTAFHKIVNAHIYEDQLELMRDVQIKREPLSSPKLVINPDIKSLEDLETWVTMDDFEVTGYEHHEAIKYPFSV 283
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_HAEPS (Thymidylate synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=thyA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.347e-16 Identity = 58/210 (27.62%), Postives = 101/210 (48.10%), Query Frame = 3 Query: 42 WDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPEKK---DIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 WD NA+ + E D+G VYG R+F G D L +++ +K ++R + + ++P + L PC F + +G L QRSAD+ LG+ +N+ ++A + G H I +AH+Y + + + + QL++ P P LKINP+ K D++++V+ DF++ GY+ H I+ +V Sbjct: 82 WDANANENAAWLTNPHRKGEDDMGLVYGAVGRNF--------PKVGGGSVDLLRQIVDDLKRGVDNRGEIYTFYHPGAFHMGCLRPCLHSHHFSLLDGTLYLNSTQRSADVPLGLNWNMIQCYTFLALMAQITGHQAGQAFHKIVNAHIYEDQLELMRDVQLKRTPFKAPTLKINPDIKSLEDLETWVTLADFEVEGYEYHPSIQYPFSV 283
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_SHEFN (Thymidylate synthase OS=Shewanella frigidimarina (strain NCIMB 400) GN=thyA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15 Identity = 60/210 (28.57%), Postives = 97/210 (46.19%), Query Frame = 3 Query: 42 WDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPE---KKDIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 WD NA+ + D+G +YG R F G D L +++ + N ++R +L+ ++P L L PC F + L QRS D+ LG+ FN+ +L ++A + PG H I +AH+Y + + P+ + QL + P P L INP+ KDI+++V+ +DF + Y H I+ AV Sbjct: 82 WDANANENQAWLDNPNRKGPDDMGLIYGALGRAFPKP--------DGGHVDLLQQIVDDLSNGIDNRGEILTFYHPGAFDLGCLRPCMYEHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYVLLALMAQITGHKPGKAYHKIVNAHIYEDQLEPMRDVQLAREPFASPKLIINPKIKTLKDIETWVTLDDFSVEDYQHHDAIKYPFAV 283
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_PSEA6 (Thymidylate synthase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=thyA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 59/210 (28.10%), Postives = 98/210 (46.67%), Query Frame = 3 Query: 42 WDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPEKK---DIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 WD NA++ + E D G +YG R+F G D L +I +KN +DR + + ++P + L PC F + + L QRS D+ LG+ FN+ L ++A + G H I +AH+Y + + + + QL++ P P L INP+ K D++++V+ +DF + GY H I+ +V Sbjct: 82 WDANANQNQAWLDNPHRKGEDDCGLIYGKIGRNFPKP--------DGGSIDLLAKIIYDLKNGIDDRGEIFTFYHPGAFHMGCLRPCMYSHHFSLLDDTLYLNSTQRSCDVPLGLNFNMVQVYFLLAIVAQITGKKAGMAYHKIVNAHIYEDQLELMRDVQLKREPLGMPKLIINPDIKSLEDLETWVTMDDFSIEGYAHHPAIKYPFSV 283
BLAST of EY720317 vs. ExPASy Swiss-Prot
Match: TYSY_HAEDU (Thymidylate synthase OS=Haemophilus ducreyi GN=thyA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12 Identity = 56/210 (26.67%), Postives = 99/210 (47.14%), Query Frame = 3 Query: 42 WDGNASREYLDSVGLTDREEGDLGPVYGFQWRHFGARYTNMHADYSGQGFDQLLDVINKIKNNPNDRRIVLSAWNPFDLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEE-QLQKLPKPFPILKINPEKK---DIDSFVS-EDFKLIGYDPHQKIEMKMAV 656 WD NA++ + D+G VYG R F AD+ D L +++ + N ++R + + ++P + L PC F + +G L QRSAD+ LG+ +N+ ++A + + G H I +AH+Y + + + + QL++ P P L INP K D++ +V+ +DFK+ Y H I+ ++ Sbjct: 82 WDANANQNADWLANPYRKGVDDMGLVYGAIGRKFPK------ADHGS--LDLLKQIVDDLSNGIDNRGEIYTFYHPGAFHMGCLRPCLYSHHFSLLDGTLYLNSTQRSADVPLGLNWNMVQCYTFLALMAQITNHKAGQVFHKIVNAHIYEDQLALMRDVQLKREPFATPTLTINPAIKSLEDLEIWVTLDDFKVENYFYHPSIQYPFSI 283 The following BLAST results are available for this feature:
BLAST of EY720317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720317 ID=EY720317; Name=EY720317; organism=Citrus sinensis; type=EST; length=849bpback to top |