CX053682

Overview
NameCX053682
Unique NameCX053682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.011e-68
Identity = 123/152 (80.92%), Postives = 132/152 (86.84%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRS 458
            QCLGAICGVG VKAF    Y   GGGAN++A GY+ G+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN  K WDDHWIFWVGPF+GA  AA YHQ++LRA+  K+LGSFRS
Sbjct:  132 QCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRS 283          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.851e-68
Identity = 122/152 (80.26%), Postives = 132/152 (86.84%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRS 458
            QCLGAICGVG VKAF    Y + GGGAN +A GYN G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI+N  K WDDHWIFWVGPF+GA  AA YHQ++LRA+  K+LGSFRS
Sbjct:  130 QCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRS 281          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.303e-67
Identity = 122/152 (80.26%), Postives = 131/152 (86.18%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRS 458
            QCLGA CGVGLVK F    YN  GGGAN ++ GYN G  +GAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARSFGAAVIYNN KAWDD WIFWVGPFVGA  AA YHQ++LRA A+KA GS RS
Sbjct:  131 QCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYGSVRS 282          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.303e-67
Identity = 125/152 (82.24%), Postives = 134/152 (88.16%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRS 458
            QCLGAICGVGLVK F    Y   GGGAN +++GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYNNDKAWDDHWIFWVGPF+GA  AAAYHQY+LRA+A K LGS  S
Sbjct:  132 QCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK-LGSSAS 282          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.303e-67
Identity = 125/153 (81.70%), Postives = 133/153 (86.93%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 461
            QCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN DKAWDD WIFWVGP +GA  AAAYHQY+LRA+A K LGS+RSN
Sbjct:  136 QCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSN 287          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.303e-67
Identity = 125/153 (81.70%), Postives = 133/153 (86.93%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 461
            QCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN DKAWDD WIFWVGP +GA  AAAYHQY+LRA+A K LGS+RSN
Sbjct:  137 QCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSN 288          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.303e-67
Identity = 123/153 (80.39%), Postives = 133/153 (86.93%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 461
            QCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ LGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G AVIYN DKAWDD WIFWVGP +GA  AAAYHQY+LRA+A K LGS+RSN
Sbjct:  136 QCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSN 287          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.223e-67
Identity = 122/154 (79.22%), Postives = 132/154 (85.71%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNP 464
            QCLGAICGV LVKAF    +   GGGAN ++ GY+ G+ + AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN DKAWD HWIFWVGPF GA  AA YHQ++LRA AIKALGSFRS P
Sbjct:  131 QCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRSQP 284          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.718e-65
Identity = 116/146 (79.45%), Postives = 126/146 (86.30%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKA 440
            QCLGAICG G+VK F  + Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AWDDHWIFWVGPF+GA  AA YHQ ++RA   K+
Sbjct:  139 QCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284          
BLAST of CX053682 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.550e-65
Identity = 118/153 (77.12%), Postives = 131/153 (85.62%), Query Frame = 3
Query:    3 QCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 461
            QCLGA+CGV LVK F    Y+  GGGAN +A+GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YNN KAW D WIFWVGPF+GA  AA YHQ +LRA+A +  GSFRSN
Sbjct:  131 QCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASA-RGYGSFRSN 282          
The following BLAST results are available for this feature:
BLAST of CX053682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
PIP21_ARATH2.011e-6880.92Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP23_ARATH5.851e-6880.26Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP26_ARATH1.303e-6780.26Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP25_MAIZE1.303e-6782.24Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP24_MAIZE1.303e-6781.70Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE1.303e-6781.70Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ1.303e-6780.39Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH2.223e-6779.22Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH2.718e-6579.45Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP25_ORYSJ3.550e-6577.12Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_7E05_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-7E05-J10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053682 ID=CX053682; Name=CX053682; organism=Citrus sinensis; type=EST; length=708bp
CTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATG
AAGCATGAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGG
CTACAACAAAGGATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGC
TTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGAC
TCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT
GGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTA
GGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGAC
CATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAGCGGC
ATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGATCAT
TCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAATATGAACC
ACCAACCAGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTTCTGTT
ATTTGTTCGCTTGTGTCTATTATGAGATGATGTTTGCTATGATAATTATG
ACCCTTCTCTTTATTTTTCCATTTCATATTTTGATTGAGTAGCTATAGCT
TTGTCTCCGTGAATCATTGTTAATGAGTAGTGGTGATGTTTGTTTTTTCC
TAAAAAAA
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