DR403533

Overview
NameDR403533
Unique NameDR403533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 259.996 bits (663), Expect = 6.790e-69
Identity = 128/185 (69.19%), Postives = 147/185 (79.46%), Query Frame = 1
Query:   52 QVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            QVI CKAAVAWE  K L IE+++VAPP+A EV+IKIL TA+CHTDAYT SG DPEG FP ILGHE AGIVESVGEGVT+++ GD VIP Y  +C ECKFC + KTNLC K+R   G G +M D  SRF+  GK ++HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA  NTA
Sbjct:    4 QVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-LMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTA 187          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 6.790e-69
Identity = 125/188 (66.49%), Postives = 143/188 (76.06%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            TEG+VITCKAAVAWE  K LVIED++V PPQ GEV+IKIL+T +CHTD+YT SG DPEG+FPCILGHE  GIVES+GEGVT V+ GDHVIP Y  EC  CKFC S KTNLC K+R   G G  M D  +RF   GK I+HFMGTSTFSQYTV+ ++S   +   APLDKVCLLGCG+ TG GA   TA
Sbjct:    3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQ-MPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITA 189          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 6.790e-69
Identity = 124/188 (65.96%), Postives = 147/188 (78.19%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T GQVI CKAAVAWE  K LV+E+V VAPPQ  EV++KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVTE+ PGDHV+P +  EC +C  CKS ++N+C  +R  T  GV++ND +SRFSINGKPIYHF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    4 TVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVA 191          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 8.867e-69
Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T GQVI C+AAVAWE  K LVIE+V+VAPPQAGEV++KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT ++PGDH +P +  EC EC  CKS ++N+C  +R  T  GV++ND KSRFSI G+P++HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    4 TAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATVNVA 191          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 8.867e-69
Identity = 124/188 (65.96%), Postives = 147/188 (78.19%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T GQVI CKAAVAWE  K LV+E+V VAPPQ  EV++KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVTE+ PGDHV+P +  EC +C  CKS ++N+C  +R  T  GV++ND +SRFSINGKPIYHF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    4 TVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVA 191          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.513e-68
Identity = 121/188 (64.36%), Postives = 146/188 (77.66%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T GQ+I C+AAVAWE  K LVIE+V+VAPPQAGEV++KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT ++PGDH +P +  EC EC  CKS ++N+C  +R  T  GV++ND KSRFSI G+P++HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    4 TVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVA 191          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.975e-68
Identity = 123/188 (65.43%), Postives = 146/188 (77.66%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T GQVI C+AAVAWE  K LVIE+V+VAPPQA EV+IKILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT+++ GDHV+P +  EC +C  CKS ++N+C  +R  T  GV+++D KSRFSI GKPIYHF+GTSTFS+YTVVH   +AKI+P APLDKVCLL CG+ TGLGA  N A
Sbjct:    4 TAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGATLNVA 191          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 1.975e-68
Identity = 123/188 (65.43%), Postives = 146/188 (77.66%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T GQVI CKAAVAWE  K LV+E+V VAPPQ  EV++KIL+T+LCHTD Y W  K    +FP ILGHEAAGIVESVGEGVT++ PGDHV+P +  EC +C  CKS ++N+C  +R  T  GV++ND KSRFSING PIYHF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    4 TVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVA 191          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 1.975e-68
Identity = 123/188 (65.43%), Postives = 146/188 (77.66%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T G+VI CKAAVAWE  K LVIE+V+VAPPQA EV++KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEGVT++ PGDHV+P +  EC EC  CKS ++N+C  +R  T  GV++ D KSRFSINGKPIYHF+GTSTFS+YTV+H   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVA 190          
BLAST of DR403533 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.975e-68
Identity = 123/188 (65.43%), Postives = 146/188 (77.66%), Query Frame = 1
Query:   43 TEGQVITCKAAVAWEPNKALVIEDVQVAPPQAGEVQIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECLECKFCKSGKTNLCGKVRGATGAGVIMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGALWNTA 606
            T G+VI CKAAVAWE  K LVIE+V+VAPPQA EV++KILFT+LCHTD Y W  K    +FP I GHEA GIVESVGEGVT++ PGDHV+P +  EC EC  CKS ++N+C  +R  T  GV++ D KSRFSINGKPIYHF+GTSTFS+YTV+H   VAKI+P APLDKVC+L CG+ TGLGA  N A
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVA 190          
The following BLAST results are available for this feature:
BLAST of DR403533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ADHX_MOUSE6.790e-6969.19Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_DICDI6.790e-6966.49Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH3_SOLTU6.790e-6965.96Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH1_TRIRP8.867e-6964.89Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_SOLTU8.867e-6965.96Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PEA1.513e-6864.36Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH_MALDO1.975e-6865.43Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH2_SOLLC1.975e-6865.43Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_ORYSJ1.975e-6865.43Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.975e-6865.43Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAC-PNP1241G08 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403533 ID=DR403533; Name=DR403533; organism=Citrus sinensis; type=EST; length=607bp
GGGGGTTTTTCANNNTCATTTTCATTGTCAGCAGCCATGTCTACTGAAGG
TCAAGTCATCACATGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGGCAT
TGGTGATTGAGGATGTGCAGGTTGCTCCGCCTCAGGCTGGCGAGGTCCAA
ATCAAGATTCTCTTCACTGCTCTCTGCCACACTGATGCTTACACCTGGAG
CGGCAAGGATCCTGAAGGTCTCTTCCCCTGTATCCTAGGTCATGAGGCTG
CTGGGATTGTGGAGAGTGTTGGTGAAGGTGTGACCGAAGTTCAACCAGGT
GATCATGTCATCCCTTGTTACCAGGCAGAATGCCTAGAGTGCAAGTTTTG
CAAGTCTGGAAAGACTAACCTCTGTGGTAAGGTTAGGGGTGCCACTGGTG
CTGGTGTCATAATGAATGACCGCAAGAGCCGTTTCTCGATAAATGGAAAG
CCTATCTATCACTTCATGGGAACCTCAACATTTAGCCAGTACACAGTTGT
GCATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAG
TATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCACTTTGGAAC
ACTGCAA
back to top