CX053418

Overview
NameCX053418
Unique NameCX053418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: CRU3_BRANA (Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.620e-54
Identity = 105/215 (48.84%), Postives = 149/215 (69.30%), Query Frame = -1
Query:  189 DAEGDIVRVEEELRVLSPQRGRXXXXXXXXXXQGSG----DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 821
            D+ G+IVRV+   +V+ P   +          +G      DNG+EETIC+M+   NI+DP+ AD Y P  GRVT+VN + LPIL+YI+LSA +G L  NAM+ P +N+NA+ ++Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  AM S LAGR S +R LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  278 DSRGNIVRVKGPFQVVRPPLRQPYESEQWRHPRGPPQSPQDNGLEETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHQNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTLETTL 492          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: CRU1_RAPSA (Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.176e-54
Identity = 105/215 (48.84%), Postives = 148/215 (68.84%), Query Frame = -1
Query:  189 DAEGDIVRVEEELRVLSPQRGRXXXXXXXXXXQGSG----DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV 821
            D  G+IVRV+   +V+ P   +          +G      DNG+EETIC+M+   NI+DP+ AD Y P  GRVT+VN + LPIL+YI+LSA +G L  NAM+ P +N+NA+ ++Y T+G  R+Q+V +NG+NV D Q+++GQL+V+PQGFA V ++     EWISFKTN  AM S LAGR S +R LPL+VI N+FQ+S +EA+R+K+N  E T+
Sbjct:  248 DNRGNIVRVKGPFQVVRPPLRQQYESEQWRHPRGPPQSPQDNGLEETICSMRTHENIDDPARADVYKPNLGRVTSVNSYTLPILQYIRLSATRGILQGNAMVLPKYNMNANEILYCTQGQARIQVVNDNGQNVLDQQVQKGQLVVIPQGFAYVVQSHGNNFEWISFKTNANAMVSTLAGRTSALRALPLEVITNAFQISLEEARRIKFNTPETTL 462          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: CRUA_BRANA (Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.003e-53
Identity = 102/219 (46.58%), Postives = 149/219 (68.04%), Query Frame = -1
Query:  168 DAEGDIVRVEEELRVLSPQRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FSPGPRS 821
            D  G+I+RV+    V+ P                   NG+EETIC+ +   N++DPS AD Y P+ G ++T+N ++LPILR+++LSA +G++ QNAM+ P WN NA++V+Y+T G   +Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA++    WI FKTN  A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  S GP S
Sbjct:  269 DNRGNIIRVQGPFSVIRPPLRSQRPQEEV--------NGLEETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSSGPAS 479          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: CRU1_BRANA (Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 4.003e-53
Identity = 102/219 (46.58%), Postives = 149/219 (68.04%), Query Frame = -1
Query:  168 DAEGDIVRVEEELRVLSPQRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FSPGPRS 821
            D  G+I+RV+    V+ P                   NG+EETIC+ +   N++DPS AD Y P+ G ++T+N ++LPILR+++LSA +G++ QNAM+ P WN NA++V+Y+T G   +Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA++    WI FKTN  A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  S GP S
Sbjct:  270 DNRGNIIRVQGPFSVIRPPLRSQRPQETEV-------NGLEETICSARCTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFRWIEFKTNANAQINTLAGRTSVLRGLPLEVISNGYQISLEEARRVKFNTIETTLTHSSGPAS 481          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: CRU4_BRANA (Cruciferin CRU4 OS=Brassica napus GN=CRU4 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.521e-52
Identity = 102/214 (47.66%), Postives = 152/214 (71.03%), Query Frame = -1
Query:  174 GDIVRVEEELRVLSPQRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVF-SPGP 812
            G+IV+V+ +  V+ P   R          +G   NG+EET+CTM+   N++DPS AD Y P  G ++T+N +NLPILR+++LSA +G+++ NAM+ P WN+NA++ +Y+T+G   +Q V +NG+ VFD +I +GQL+VVPQGFAVVKRA+++  +WI FK+ND A  + LAGR SV+RGLPL+VI N +Q+S  EA+ +K++  E T+  S GP
Sbjct:  246 GNIVKVQGQFGVIRPPL-RQGQGGQQPQEEG---NGLEETLCTMRCTENLDDPSSADVYKPSLGYISTLNSYNLPILRFLRLSALRGSIHNNAMVLPQWNVNANAALYVTKGKAHIQNVNDNGQRVFDQEISKGQLLVVPQGFAVVKRATSQQFQWIEFKSNDNAQINTLAGRTSVMRGLPLEVISNGYQISPQEARSVKFSTLETTLTQSSGP 455          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: 11S3_HELAN (11S globulin seed storage protein G3 OS=Helianthus annuus GN=HAG3 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.521e-52
Identity = 99/227 (43.61%), Postives = 146/227 (64.32%), Query Frame = -1
Query:  180 DAEGDIVRVEEELRVLSPQRGRXXXXXXXXXXQ-------------GSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFSP 821
            D  G IV V ++L+++ P + R                        G   NG+EETIC+MK K NI++PS AD  NP+ G +  +N F  PIL +++LS E+G L  NA+ +PHW +NAH+++Y+T G  R+QIV   G +VFD ++REGQ++V+PQ FAV+KRA+ +G  W+SFKTND AM + LAGR S     PL +  N +Q+SR+EAQ+LK++++E  +F+P
Sbjct:  255 DQRGHIVNVGQDLQIVRPPQDRRSPRQQQEQATSPRQQQEQQQGRRGGWSNGVEETICSMKFKVNIDNPSQADFVNPQAGSIANLNSFKFPILEHLRLSVERGELRPNAIQSPHWTINAHNLLYVTEGALRVQIVDNQGNSVFDNELREGQVVVIPQNFAVIKRANEQGSRWVSFKTNDNAMIANLAGRVSASAASPLTLWANRYQLSREEAQQLKFSQRETVLFAP 481          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: 12S2_ARATH (12S seed storage protein CRB OS=Arabidopsis thaliana GN=CRB PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52
Identity = 101/218 (46.33%), Postives = 144/218 (66.06%), Query Frame = -1
Query:  168 DAEGDIVRVEEELRVLSPQRGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFSPGPRS 821
            D  G+IV+V     V+ P   R               NG+EET+CTM+   N++DPS AD Y P  G ++T+N +NLPILR ++LSA +G++ +NAM+ P WN+NA++ +Y+T G   +Q+V +NGE VFD +I  GQL+VVPQGF+V+K A     EWI FKTN+ A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K++  E T+    P S
Sbjct:  236 DNRGNIVKVNGPFGVIRPPLRRGEGGQQPHEIA----NGLEETLCTMRCTENLDDPSDADVYKPSLGYISTLNSYNLPILRLLRLSALRGSIRKNAMVLPQWNVNANAALYVTNGKAHIQMVNDNGERVFDQEISSGQLLVVPQGFSVMKHAIGEQFEWIEFKTNENAQVNTLAGRTSVMRGLPLEVITNGYQISPEEAKRVKFSTIETTLTHSSPMS 449          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: 13S2_FAGES (13S globulin seed storage protein 2 OS=Fagopyrum esculentum GN=FA18 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.196e-51
Identity = 91/182 (50.00%), Postives = 131/182 (71.98%), Query Frame = -1
Query:  180 GSG-DNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFSP 722
            GSG  NG+E+  C +K + N N P+    +NPR GR+ TVN  +LPIL ++QLSA+   LY+NA++ P WNLNAHS +Y+TRG GR+Q+V + G++VFD +++ GQ++VVPQGFAVV +A   GLEW+  K +  A+TS + GR SV+R +P++V+ NS+ +S  EA +LK  RQE+ VF P
Sbjct:  308 GSGRSNGVEQGFCNLKFRRNFNTPTNTYVFNPRAGRINTVNSNSLPILEFLQLSAQHVVLYKNAIIGPRWNLNAHSALYVTRGEGRVQVVGDEGKSVFDDKVQRGQILVVPQGFAVVLKAGREGLEWVELKNSGNAITSPIGGRTSVLRAIPVEVLANSYDISTKEAYKLKNGRQEVEVFRP 489          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: GLUB5_ORYSJ (Glutelin type-B 5 OS=Oryza sativa subsp. japonica GN=GLUB5 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.391e-51
Identity = 99/234 (42.31%), Postives = 153/234 (65.38%), Query Frame = -1
Query:  165 DAEGDIVRVEEELRVLSPQ--------------RGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSPGPRSQ 821
            D  G+I+RV+  L++L P               + +            +  NG++E  CT+K + NI +PS AD YNPR GR+T +N    PIL  +QLSA + NLYQNA+++P WN+NAHS+VYI +G+ R+Q+V+  G+ VF+G +R GQL+++PQ + V+K+A + G ++ISFKTN  +M S LAG+ S+ R +P+DVI N++++SR++A+ LK NR +EL  F+P  + Q
Sbjct:  252 DQRGEIIRVKNGLKLLRPAFAQQQEQAQQQEQAQAQYQVQYSEEQQPSTRCNGLDENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQ 485          
BLAST of CX053418 vs. ExPASy Swiss-Prot
Match: GLUB4_ORYSJ (Glutelin type-B 4 OS=Oryza sativa subsp. japonica GN=GLUB4 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.391e-51
Identity = 99/234 (42.31%), Postives = 153/234 (65.38%), Query Frame = -1
Query:  165 DAEGDIVRVEEELRVLSPQ--------------RGRXXXXXXXXXXQGSGDNGIEETICTMKLKHNINDPSGADAYNPRGGRVTTVNRFNLPILRYIQLSAEKGNLYQNAMMAPHWNLNAHSVVYITRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRASNRGLEWISFKTNDVAMTSQLAGRASVIRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFSPGPRSQ 821
            D  G+I+RV+  L++L P               + +            +  NG++E  CT+K + NI +PS AD YNPR GR+T +N    PIL  +QLSA + NLYQNA+++P WN+NAHS+VYI +G+ R+Q+V+  G+ VF+G +R GQL+++PQ + V+K+A + G ++ISFKTN  +M S LAG+ S+ R +P+DVI N++++SR++A+ LK NR +EL  F+P  + Q
Sbjct:  252 DQRGEIIRVKNGLKLLRPAFAQQQEQAQQQEQAQAQYQVQYSEEQQPSTRCNGLDENFCTIKARLNIENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVNAHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQQ 485          
The following BLAST results are available for this feature:
BLAST of CX053418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CRU3_BRANA3.620e-5448.84Cruciferin CRU1 OS=Brassica napus GN=CRU1 PE=3 SV=... [more]
CRU1_RAPSA6.176e-5448.84Cruciferin PGCRURSE5 OS=Raphanus sativus GN=CRURS ... [more]
CRUA_BRANA4.003e-5346.58Cruciferin OS=Brassica napus GN=CRUA PE=1 SV=1[more]
CRU1_BRANA4.003e-5346.58Cruciferin BnC1 OS=Brassica napus GN=BnC1 PE=3 SV=... [more]
CRU4_BRANA1.521e-5247.66Cruciferin CRU4 OS=Brassica napus GN=CRU4 PE=1 SV=... [more]
11S3_HELAN1.521e-5243.6111S globulin seed storage protein G3 OS=Helianthus... [more]
12S2_ARATH4.426e-5246.3312S seed storage protein CRB OS=Arabidopsis thalia... [more]
13S2_FAGES2.196e-5150.0013S globulin seed storage protein 2 OS=Fagopyrum e... [more]
GLUB5_ORYSJ6.391e-5142.31Glutelin type-B 5 OS=Oryza sativa subsp. japonica ... [more]
GLUB4_ORYSJ6.391e-5142.31Glutelin type-B 4 OS=Oryza sativa subsp. japonica ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_5H09_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-5H09-O18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX053418 ID=CX053418; Name=CX053418; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTACGGCAAAAACATTTAGTTTTCTTATTTCACCAGAACAAAA
CTTACAGCAGCAGTACACTTTCGAGCCAACAGCAAGGACTTTATTCCTTA
TGTACATACACATATATAGACCCTTAATATAAGCTCATTACTTTGATCAC
GCACTAACTAATTACTGTGACCTAGGCCCTGGACTAAACACAGTCAGCTC
CTGCCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGGAACG
AGTTCTGGATAACGTCCAACGGCAGCCCTCTAATCACCGAAGCCCTTCCG
GCCAGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCCACTC
CAATCCACGGTTGCTTGCCCTCTTCACCACGGCGAAGCCCTGCGGGACAA
CGATCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCCGTTC
TCCGCCACAATTTGCATCCTGCCGTTGCCCCTTGTTATGTAGACTACGCT
GTGGGCATTCAAGTTCCAGTGTGGCGCCATCATGGCATTCTGGTAGAGGT
TCCCTTTCTCAGCACTAAGCTGAATGTATCGAAGGATAGGAAGGTTGAAT
CTGTTGACGGTGGTGACGCGTCCGCCGCGGGGGTTGTACGCGTCAGCACC
CGATGGGTCATTGATGTTGTGCTTTAGCTTCATTGTACAGATAGTTTCCT
CGATGCCATTGTCTCCGCTTCCTTGGAATTCTTGTTCTTGTTCTTGTTCT
TGTTCTCTGCCTCTTTGAGGTGACAGTACTCTCAGCTCTTCTTCGACTCT
GACAATATCCCCTTCTGCATC
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