DR403413

Overview
NameDR403413
Unique NameDR403413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9848 contig Csv1_Contig9848:9..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12
Identity = 65/253 (25.69%), Postives = 112/253 (44.27%), Query Frame = 2
Query:   56 IPTIDLGEFPKQLKK-LREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIK--------RRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQ----RETIEKYAQAIQELAVDLAHKLAESMGLMDSVF----QDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            +P ID+     ++++ + ++ +E+G  +VVNH +S  ++ EM  V  E  D+P E K             +  GS +    +K  +     LY + S     D+       PH+    RE +  Y    + +A+++   L E +GL    F            IN Y  +P    + G+  H D   +T+L     V GLE+  + G ++ V P+P +L +N G    V +NG L  V+HR     +  R+S+
Sbjct:   35 LPIIDMSRGRDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELLYPLPSGD-TKDW-------PHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGA-VPGLEIAYK-GGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSV 277          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12
Identity = 68/232 (29.31%), Postives = 97/232 (41.81%), Query Frame = 2
Query:  107 EASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            EA E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P      VN+GD     SNGR  +  HR        R S+
Sbjct:   64 EACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSL 293          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11
Identity = 89/337 (26.41%), Postives = 129/337 (38.28%), Query Frame = 2
Query:   29 KSEMEERRRI-PTIDLGEFPKQ--------LKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDL----------------------------------PLEIKRRNTDVIAGS------------GYMAPTQKNPLYEALGLYD--MASSQAVADFCSHLDAS-----------------------PHQ-------------RETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW----PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDR-AGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKES 745
            ++ +EE+ RI P ID G +  Q        +++LR A E  G F++VN  +S  ++    +  ++  +L                                  PLEI     D  AGS            GY+ P       E   ++D  M +S AVA    H D S                       P Q             R+ + KY   +   A  +   LAES+ L    F ++        R+ +Y   P S    GVQ HTD+  LT++  D NV GLE++D  +  F+ V P PG L  NLGDI  + +N R  +  HRV C  S
Sbjct:   15 EASLEEQNRIMPLIDFGPYVNQEPGAHERIIQQLRAACESTGFFQIVNSPISPDVVKNAFRASKQFFELPFDEKLTLSKDMFSNRGYELMEDFVLEGEEDSSSPLEIS--GIDFEAGSYPGEAPLPPSSIGYVLPPSSLANGEGSSMFDADMTTSNAVA----HGDESISNEFRESFYFGNDNLSKDRLLRPFQGPNKWPSTAGSSFRKALVKYHDQMLAFANHVMSLLAESLELSPDAFDEFCSDPTTSIRLLRY---PSSPNRLGVQEHTDADALTLMSQD-NVKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRV-CNNS 340          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.373e-11
Identity = 65/250 (26.00%), Postives = 106/250 (42.40%), Query Frame = 2
Query:   56 IPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRN--TDVIA-GSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQ--FRINKYNFAPE----SVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            IP +DL   P     +  A  ++G F++VNH V   LMA ++             K R    D    GS  + P       E L L       +    C   +   H R  +E Y  A++ +   +   +AE +G+     +  + +D      FR+N Y   PE    +    G   HTD   +++L+ + +  GL++    G +V V P   +  +N+GD   V +NGR  +VKHRV    +  R+S+
Sbjct:   27 IPVVDLTH-PDAKNLIVNACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPDPFGYGSKRIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSN-STSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSM 274          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 66/279 (23.66%), Postives = 121/279 (43.37%), Query Frame = 2
Query:   14 PDKQIKS---------EMEERRRIPTIDLGEFP--------KQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRR-NTDVIAGS--GY---MAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVF-------QDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVS 760
            P++++KS         +  E  ++PTIDL E          K  ++L++A+ +WG   ++NH +   L+  +K   +E  +LP+E K     D  AG+  GY   +A      L      +     +   D        P       +YA+ ++ LA  +   L+  +GL            +D   Q +IN Y   P+   + G + HTD   LT +  +  V GL++      +V    +P ++ +++GD   + SNG+  ++ HR    +  +R+S
Sbjct:   30 PEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHN-MVPGLQLF-YEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 306          
BLAST of DR403413 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 72/268 (26.87%), Postives = 114/268 (42.54%), Query Frame = 2
Query:   14 PDKQIKSEMEERRRIPTIDLGEFPKQLKKLR---EASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLY---DMASSQAVADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLPVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 763
            PD++  S       +P IDL      L+  R   EA  + G F VVNH VS +L+A+  +++    D+PL  K++       S GY +      + K P  E L      D + S+ V D+ S       ++  +  + Y +A+  L++ +   L  S+G+        F++     R+N Y        + G   H D   LTIL  D +V GL+V      +  + P P    VN+GD     SNG   +  HR      + R S+
Sbjct:   49 PDEEKPSIDIPELNVPFIDLSSQDSTLEAPRVIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQD-HVNGLQVF-VDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSM 314          
The following BLAST results are available for this feature:
BLAST of DR403413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IDS2_HORVU3.984e-1225.69Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
GAO1A_WHEAT3.984e-1229.31Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
ISP7_SCHPO1.159e-1126.41Sexual differentiation process protein isp7 OS=Sch... [more]
G2OX_PHACN3.373e-1126.00Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
LDOX_PERFR5.753e-1123.66Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
GAOX2_ARATH7.513e-1126.87Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244P03 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244P03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403413 ID=DR403413; Name=DR403413; organism=Citrus sinensis; type=EST; length=763bp
GGGGACGTATTCACCAGATAAACAAATAAAAAGTGAGATGGAGGAGAGGA
GAAGGATCCCGACGATAGATCTGGGGGAATTCCCGAAGCAGCTGAAGAAA
CTGAGAGAAGCAAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAA
GGTCTCGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGAGGGAGCTTT
TGGATCTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGC
AGCGGCTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGG
TCTCTACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACC
TGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCA
ATACAAGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGG
GTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACA
AGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACAC
ACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGG
CCTCGAAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGC
CCGGCACCCTCCCTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAAC
GGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAAT
AAGAGTATCGATT
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