DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_STAA8 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.606e-58
Identity = 109/204 (53.43%), Postives = 148/204 (72.55%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MPL + L+ +L  RL++VRK+ T  +LRPDGK QVTVEY        P R+ T+++STQH E VT EQI ED+K HVI P +P + ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+GLA +C VQ++YAIGV EP+S+ +DT+GTGK+S+  ++  ++++F
Sbjct:  147 MPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN---PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHF 347          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.606e-58
Identity = 109/204 (53.43%), Postives = 148/204 (72.55%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MPL + L+ +L  RL++VRK+ T  +LRPDGK QVTVEY        P R+ T+++STQH E VT EQI ED+K HVI P +P + ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+GLA +C VQ++YAIGV EP+S+ +DT+GTGK+S+  ++  ++++F
Sbjct:  147 MPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN---PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHF 347          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.606e-58
Identity = 114/204 (55.88%), Postives = 144/204 (70.59%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MPL + LA +L  RL+EVRK+    +LRPDGKTQVTVEY +      P R+ T++ISTQH    T+E+I  DL EHV+ PV+P+  LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK+VVA+GLA RC +Q++YAIGV +P+SV V+T+GT KI ++ I  L+K NF
Sbjct:  146 MPLAIDLAHRLARRLSEVRKSDILDYLRPDGKTQVTVEYEDNR----PVRIDTIVISTQHHPEATQERIRRDLLEHVVFPVVPSELLDESTRYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLAERCEIQLAYAIGVAQPVSVLVETFGTAKIDEEKIGELVKNNF 345          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.606e-58
Identity = 109/206 (52.91%), Postives = 150/206 (72.82%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MP+ + +A KL  RL+EVRKN T P+LRPDGKTQVTVEY N      P R+  ++ISTQH   +  EQI +D+KEHVIK ++P+  LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VDT+GTGK++D++I++++ + F
Sbjct:  141 EYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEYENGK----PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNKVF 342          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 7.321e-58
Identity = 112/206 (54.37%), Postives = 142/206 (68.93%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLT+VLA KL  ++ E+R++    W RPD KTQVT EY    G+ VP+RVHT+++S QH E ++ E +  ++ E V+K VIPA ++D  TI H+NP G FVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V +GL +RCLVQVSYAIG+ EPLS+ V  YGT   S K++L +I+ NF
Sbjct:  159 ECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSHKSQKELLDIIRRNF 364          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.562e-58
Identity = 109/207 (52.66%), Postives = 149/207 (71.98%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  RL E+RK K  P+LRPD K+QVTVEY ++G    PQRV T++ISTQHD+  T EQI +D+KE VI  VIP   LD+ T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSA+Y  R  AK++VA+GLA++  VQ++YAIGV +P+S+ ++T+GT  + +  ++  +++NF
Sbjct:  140 PELMPLPIALSHRLVRRLAELRKEKVLPYLRPDAKSQVTVEYDDQGQ---PQRVDTIVISTQHDDETTLEQIEKDIKEQVINEVIPHELLDDETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKVEVQLAYAIGVAQPVSISINTFGTSDLPESKLIEAVRKNF 343          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_DEIRA (S-adenosylmethionine synthetase OS=Deinococcus radiodurans GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.562e-58
Identity = 116/207 (56.04%), Postives = 143/207 (69.08%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + LA  L  RL E+RK+ T P+LRPD K QVTV    E  +     V T++ISTQH + VT+EQI  D+ EHVI  VIPA  L+E+T + +NPSGRFVIGGPHGD GLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+GLARR LV+++YAIG   P+S+ VDTYGTG +SD+ +  LI  +F
Sbjct:  153 PELMPLPISLAHGLTRRLAELRKDGTLPYLRPDAKAQVTVVRNGEPHSATETAVDTIVISTQHSDDVTQEQIRADMLEHVIPAVIPAELLNEQTRYFINPSGRFVIGGPHGDTGLTGRKIIVDTYGGAVPHGGGAFSGKDPTKVDRSAAYYARYVAKNIVAAGLARRALVEIAYAIGRAHPVSLRVDTYGTGTVSDEKLDELIAAHF 359          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.562e-58
Identity = 114/207 (55.07%), Postives = 147/207 (71.01%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMP+ ++LA KL  +L+EVRKN    +LRPDGK+QVTVEY  +     P RV TV+ISTQH   V+ + I +D+ EHVI PVIP   LDE T + +NP+GRFV+GGP GD+GLTGRKII+DTY             KD TKVDRSAAY  R  AK++VASG+AR+C VQ++YAIGV +P+SV VDT+GT  I ++ I  L+ ++F
Sbjct:  143 PELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGIARKCEVQLAYAIGVAKPVSVLVDTFGTAVIPEEKISELVNKHF 345          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 9.562e-58
Identity = 110/206 (53.40%), Postives = 145/206 (70.39%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RL+EVRK    P+LRPDGKTQVTVEY        P R+  ++ISTQH   +T EQI  ++KEHVI PV+P   +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+ LA  C VQ++YAIGV +P+S+ ++T+G+GK S++ ++ +++ NF
Sbjct:  146 ELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENNK---PVRIDAIVISTQHHPEITLEQIQRNIKEHVINPVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAELADSCEVQLAYAIGVAQPVSISINTFGSGKASEEKLIEVVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_STAAR (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MRSA252) GN=metK PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.249e-57
Identity = 108/204 (52.94%), Postives = 148/204 (72.55%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MPL + L+ +L  RL++VRK+ T  +LRPDGK QVTVEY        P R+ T+++STQH + VT EQI ED+K HVI P +P + ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+GLA +C VQ++YAIGV EP+S+ +DT+GTGK+S+  ++  ++++F
Sbjct:  147 MPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN---PVRIDTIVVSTQHADDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEPVSIAIDTFGTGKVSEGQLVEAVRKHF 347          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAA85.606e-5853.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA35.606e-5853.43S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_DESHD5.606e-5855.88S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_CLOBJ5.606e-5852.91S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_DROME7.321e-5854.37S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK_ENTFA9.562e-5852.66S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_DEIRA9.562e-5856.04S-adenosylmethionine synthetase OS=Deinococcus rad... [more]
METK_CLOCE9.562e-5855.07S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_BACSU9.562e-5853.40S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_STAAR1.249e-5752.94S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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