DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/207 (50.24%), Postives = 135/207 (65.22%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P+LMP  +  A +L  R +E+RK+   PWLRPD K+QVT  Y +      P  V TV++STQH   +++  I E + E +IKP  P   +  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLAR+C VQVSYAIGV EP+++ V T GTG I D+ I  L++E+F
Sbjct:  136 PDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHF 338          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_AMOPS (S-adenosylmethionine synthetase OS=Amoeba proteus symbiotic bacterium GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 98/204 (48.04%), Postives = 137/204 (67.16%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  +  + +L AR  E+RKN   PWLRPDGK Q+T++Y ++G    P  + T++ STQH   ++ + + E ++E +IKPV+P  +L   T +++NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRS AY  R  AK++VA+G+A +C +QVSYAIGV EP S+ VDT+GTG + +  I+ LIK +F
Sbjct:  135 MPAPIAYSHRLMARQAELRKNNKLPWLRPDGKCQLTLKY-DQGK---PVAIDTIVFSTQHAPEISHKDLVEAVREEIIKPVLPEEWLSAATRYYINPTGRFVIGGPLGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARHVAKNLVAAGIAEKCEIQVSYAIGVAEPTSISVDTFGTGHLRNNVIIDLIKTHF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SALRD (S-adenosylmethionine synthetase OS=Salinibacter ruber (strain DSM 13855) GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 97/207 (46.86%), Postives = 138/207 (66.67%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKT-CPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMP+ +  + +L   L  +RK     P+LRPD K+QVT+EY+ +   M P+RVHTV++STQHDE V +++I ED+++ ++   +P   LDE  I H+NP+GRFV GGPHGD G+TGRKII+DTY             KD +KVDRSA Y  R  AK++VA+ L     VQ++YAIGV EP+S+ V T GTG + D ++  +++E+F
Sbjct:  130 ELMPMPITFSHRLVQELAHIRKETDKMPYLRPDSKSQVTIEYKED--RMTPRRVHTVVVSTQHDEGVPQKKIREDVRDILLPRALPTDLLDEDLILHVNPTGRFVTGGPHGDTGVTGRKIIVDTYGGKGAHGGGAFSGKDPSKVDRSATYAARHVAKNLVAAELCDEAEVQLAYAIGVAEPVSIDVSTNGTGVLPDTELCEMVREHF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAEDU (S-adenosylmethionine synthetase OS=Haemophilus ducreyi GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 99/205 (48.29%), Postives = 136/205 (66.34%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRK+    WLRPD K+Q+T  Y N         +  V++STQH E V ++++ E + E +IKP +P+ +L++ T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AKS+VA+GLA RC +Q+SYAIGV +P S+ V+T+GTGK+S+  ++ LI +NF
Sbjct:  139 LMPAPITYAHRLMQRQAEVRKSGKLAWLRPDAKSQLTFAYENNQII----GIDAVVLSTQHAEEVKQKELIEGVMEEIIKPTLPSKWLNQHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKSIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNDTLVKLIYQNF 339          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CHLP8 (S-adenosylmethionine synthetase OS=Chlorobaculum parvum (strain NCIB 8327) GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 107/209 (51.20%), Postives = 136/209 (65.07%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKN-KTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHD-------ETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGK--ISDKDI 598
            PELMP  +  A +L   L E+RK  K   +LRPD K+QVT+EY      +   RV  V++STQHD       E   +E I  D+ E+VI+ VIPA  +DE T FH+NP+GRF IGGPHGD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA +C VQVSYAIGV  P+S++++T+GTGK  +SD  I
Sbjct:  139 PELMPAAIQYAQELVRLLAEIRKEGKIMTYLRPDSKSQVTLEYDENDKVL---RVDAVVVSTQHDPEPAGMSEAEFQEVIKNDIIENVIRKVIPAELIDENTKFHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCTVQVSYAIGVARPVSIYINTHGTGKHGLSDSQI 344          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CHLCH (S-adenosylmethionine synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 105/209 (50.24%), Postives = 139/209 (66.51%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKN-KTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHD-------ETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGK--ISDKDI 598
            PELMP  +  A +L  +L E+RK  K   +LRPD K+QVT+EY N+    + +RV  ++ISTQHD       E   +E I +D+ E+VIK +IPA+ +DE T  H+NP+GRF IGGPHGD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA +C VQVSYAIGV  P+S++++T+ T K  +SD  I
Sbjct:  139 PELMPAAIQFAQQLVKKLAEIRKEGKMMTYLRPDAKSQVTLEYEND----IAKRVDAIVISTQHDPEPAGISEAEWQEIIKKDVIENVIKVLIPANMIDENTKLHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAARHVAKNIVAAGLAEKCTVQVSYAIGVARPVSIYINTHDTAKHGLSDNQI 343          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_AZOSE (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain EbN1) GN=metK PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 99/207 (47.83%), Postives = 140/207 (67.63%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P L+PL +  A ++  R +E+RK+    WLRPD K+Q+TV Y +      P  + TV++STQH   V+  QI+E + E +IKPV+P+  +     + +NP+GRFVIGGPHGD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC VQV+YAIGV  P+S+ ++T+GTG+I+D+ I+ L++ +F
Sbjct:  135 PSLIPLPIYYAHRIMQRQSELRKDGRLNWLRPDAKSQLTVRYVDGK----PVAIDTVVVSTQHSPEVSHAQITELVIEEIIKPVLPSALMQGEVRYLINPTGRFVIGGPHGDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRWVAKNIVAAGLADRCEVQVAYAIGVARPVSMMIETFGTGRITDEKIVELVQRHF 337          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_VIBCH (S-adenosylmethionine synthetase OS=Vibrio cholerae GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.635e-49
Identity = 98/205 (47.80%), Postives = 138/205 (67.32%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R   VRKN T PWLRPD K+QVT +Y  + G +V   +  V++STQH ++++   + E + E +IKPV+PA +L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+G+A RC +Q+SYAIGV +P S+ V+T+GT K+S + I+  +++ F
Sbjct:  135 LMPAPITYAHRLMQRQAAVRKNGTLPWLRPDAKSQVTFQY--DQGKIVG--IDAVVLSTQHSDSISTADLREAVMEEIIKPVLPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRCEIQLSYAIGVADPTSIMVETFGTEKVSQEIIIEAVRQFF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PSYWF (S-adenosylmethionine synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.635e-49
Identity = 99/205 (48.29%), Postives = 137/205 (66.83%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R +E+R++    WLRPD K QVT++Y N      P  +  V++STQHD  +++  + E + E++IK V+PA  L   T +H+NP+G+FVIGGP GDAG+TGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC VQ+SYAIGV EP S+ V+T+GT K+S + I+ LI+ +F
Sbjct:  135 LMPAPIEFAHRLMERQSELRRSGELKWLRPDAKAQVTLKYTNG----TPSAIDAVVLSTQHDPDISQADLQEAVMENIIKHVLPADLLHAGTRYHINPTGKFVIGGPVGDAGITGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEVQISYAIGVAEPTSISVNTFGTAKVSAEVIIELIRTHF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PSEFS (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.635e-49
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  + +L  R  E RK+   PWLRPD K+QVT  Y  EGG +V   +  V++STQH+  V+   + E + E ++K V+PA  L + T FH+NP+G+F+IGGP GD GLTGRKII+D+Y             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV +P S+ ++T+GTGKISD  I+ L++E F
Sbjct:  135 LMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRY--EGGKVVG--IDAVVLSTQHNPDVSYADLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIVKLVREIF 335          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BORBR9.584e-5050.24S-adenosylmethionine synthetase OS=Bordetella bron... [more]
METK_AMOPS9.584e-5048.04S-adenosylmethionine synthetase OS=Amoeba proteus ... [more]
METK_SALRD1.252e-4946.86S-adenosylmethionine synthetase OS=Salinibacter ru... [more]
METK_HAEDU1.252e-4948.29S-adenosylmethionine synthetase OS=Haemophilus duc... [more]
METK_CHLP81.252e-4951.20S-adenosylmethionine synthetase OS=Chlorobaculum p... [more]
METK_CHLCH1.252e-4950.24S-adenosylmethionine synthetase OS=Chlorobium chlo... [more]
METK_AZOSE1.252e-4947.83S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_VIBCH1.635e-4947.80S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_PSYWF1.635e-4948.29S-adenosylmethionine synthetase OS=Psychrobacter s... [more]
METK_PSEFS1.635e-4949.27S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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