DR403374

Overview
NameDR403374
Unique NameDR403374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 5.840e-44
Identity = 80/209 (38.28%), Postives = 113/209 (54.07%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK--LLSEANKTLKQRL-MEGYQVNTLQ---LNPSAEDCGYGLKPAQPQGDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLN--------NYMQGWL 745
            FS+RGKLYE   S  +  T+ERY +C Y     N    E  + S  QE  KLK++YE+L R+ RNLLGE+LG +  KEL++LERQL+ +L   R  +TQ M++ + +L+ K   L + NK LK +   EG+   T Q    N +A   G       P   S  + L+C  EP LQIG+Q      V   G S++        N++QGW+
Sbjct:   48 FSSRGKLYEF-GSVGIESTIERYNRC-YNCSLSNNKPEETTQ-SWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQ--QHYYVQGEGSSVSKSNVAGETNFVQGWV 251          

HSP 2 Score: 93.2041 bits (230), Expect = 5.840e-44
Identity = 47/53 (88.68%), Postives = 49/53 (92.45%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRVE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALII    GK
Sbjct:    1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.293e-43
Identity = 75/187 (40.11%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPA---DPISVVTAG 712
            FS +GKLYE  + S M K LERY++ +Y A +  +SA    + +   EY KLKA+ E +Q+ Q++L+GE+L  LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ   K L E NK L++ L+E  +V   Q+           +P      S F   E  PT  I   PA   + I  V AG
Sbjct:   48 FSTKGKLYEYATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227          

HSP 2 Score: 85.1149 bits (209), Expect = 1.293e-43
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA E+SVLCDAEVALII    GK
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.825e-42
Identity = 74/187 (39.57%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPA---DPISVVTAG 712
            FS +GKLY+  + S M K LERY++ +Y A +  +SA    + +   EY KLKA+ E +Q+ Q++L+GE+L  LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ   K L E NK L++ L+E  +V   Q+           +P      S F   E  PT  I   PA   + I  V AG
Sbjct:   48 FSTKGKLYKYATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227          

HSP 2 Score: 82.8037 bits (203), Expect = 1.825e-42
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG+V+LKRIEN INRQVTF+KRR+GLLKKA E+SVLCDAEVALII    GK
Sbjct:    1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.516e-41
Identity = 68/191 (35.60%), Postives = 110/191 (57.59%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYG-----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGLKPAQPQGD---SFFHALECEPTLQIG--YQPADPISV 700
            FS++GKL+E  + S M K LERY++ +Y      APE +V+   ++E      Y +LKA+ E L+R+QR+ LGE+L  ++SKEL++LE+QLD +LK IRS + Q M D++ ELQ   K + E N  L +++ E  ++   Q      ++ G+ + P  P       +  + +  P L +G  YQ  DP+ +
Sbjct:   48 FSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSME------YNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEEDPMEM 232          

HSP 2 Score: 86.2705 bits (212), Expect = 1.516e-41
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 9.668e-41
Identity = 72/195 (36.92%), Postives = 107/195 (54.87%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYG-----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTL------KQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFH------ALECEPTLQIG--YQPAD 688
            FS++GKL+E  S S M K LERY++ +Y      AP+ +V+A    + +   EY +LKA+ E L+R+QR+ LGEEL P++ K+L++LE+QL+ +LK IRS + Q M ++L  LQ   K + E N  L      ++ ++   Q    QLN S +D         PQ   F H      A +  P L +G  YQ  D
Sbjct:   48 FSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNA----QTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDV--------PQPQPFQHPHLYMIAHQTSPFLNMGGLYQEED 230          

HSP 2 Score: 86.2705 bits (212), Expect = 9.668e-41
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRVELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+    GK
Sbjct:    1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.137e-40
Identity = 58/128 (45.31%), Postives = 85/128 (66.41%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK--LLSEANKTLKQRLME 544
            FS +GKLYE  + S M K LERY++ +Y A +  +SA    E +   EY KLKA+ E +Q+  ++L+GE+L  LN KEL+ LE+QL+ SLK I S ++  ML++++ELQ K   L E NK L++ L+E
Sbjct:   48 FSPKGKLYEYATDSRMDKILERYERYSY-AEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174          

HSP 2 Score: 86.2705 bits (212), Expect = 2.137e-40
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+    GK
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 3.631e-40
Identity = 67/193 (34.72%), Postives = 111/193 (57.51%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYG-----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGL-KPAQPQGDSFFH----ALECEPTLQIG--YQPADPISV 700
            FS++GKL+E  + S M K LERY++ +Y      APE +V+   ++E      Y +LKA+ E L+R+QR+ LGE+L  ++ KEL++LE+QLD +LK IR+ + Q M +++ ELQ   K + E N  L +++ E  ++   Q      ++ G+ +  P  PQ     H    + +  P L +G  YQ  DP+++
Sbjct:   48 FSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSME------YNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAM 234          

HSP 2 Score: 86.2705 bits (212), Expect = 3.631e-40
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.922e-38
Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNY---GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKLLSEANK-TLKQRLME 544
            FS +GKLYE  S SSM   LERYQ+ ++      EPN   +E    +   EY  LK++ +ALQ+SQR LLGE+L  L  KEL+ LE QL+ SLK IRS + Q + ++++ELQ K  S  N+  + Q+LME
Sbjct:   48 FSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLME 173          

HSP 2 Score: 84.3445 bits (207), Expect = 1.922e-38
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+    GK
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.922e-38
Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNY---GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKLLSEANK-TLKQRLME 544
            FS +GKLYE  S SSM   LERYQ+ ++      EPN   +E    +   EY  LK++ +ALQ+SQR LLGE+L  L  KEL+ LE QL+ SLK IRS + Q + ++++ELQ K  S  N+  + Q+LME
Sbjct:   48 FSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLME 173          

HSP 2 Score: 84.3445 bits (207), Expect = 1.922e-38
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+    GK
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.225e-37
Identity = 58/157 (36.94%), Postives = 89/157 (56.69%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQ 622
            FS++GKL+E  + S M K LERY +  Y   +    ++S  E   L    E+ KLKAR E L++++RN +GE+L  L+ KEL+SLE QL  ++K IRS + Q M ++++ LQ   K+L + N  L +++ E  + NT+        C       QPQ
Sbjct:   48 FSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKE-REKNTVHQEVQLIQCSNNSSILQPQ 199          

HSP 2 Score: 87.8113 bits (216), Expect = 1.225e-37
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+I    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGK 53          
The following BLAST results are available for this feature:
BLAST of DR403374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
AGL6_ARATH5.840e-4438.28Agamous-like MADS-box protein AGL6 OS=Arabidopsis ... [more]
MAD14_ORYSJ1.293e-4340.11MADS-box transcription factor 14 OS=Oryza sativa s... [more]
MAD14_ORYSI1.825e-4239.57MADS-box transcription factor 14 OS=Oryza sativa s... [more]
AP1_SINAL1.516e-4135.60Floral homeotic protein APETALA 1 OS=Sinapis alba ... [more]
CAL_ARATH9.668e-4136.92Transcription factor CAULIFLOWER OS=Arabidopsis th... [more]
MAD15_ORYSJ2.137e-4045.31MADS-box transcription factor 15 OS=Oryza sativa s... [more]
AP1_ARATH3.631e-4034.72Floral homeotic protein APETALA 1 OS=Arabidopsis t... [more]
MAD18_ORYSJ1.922e-3846.15MADS-box transcription factor 18 OS=Oryza sativa s... [more]
MAD18_ORYSI1.922e-3846.15MADS-box transcription factor 18 OS=Oryza sativa s... [more]
AGL8_SINAL1.225e-3736.94Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244M20 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244M20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403374 ID=DR403374; Name=DR403374; organism=Citrus sinensis; type=EST; length=751bp
GGGGAAGAAAGAAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGCTGAA
GAGGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAA
ACGGCCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAG
GTTGCTCTCATCATTCTTCTCCAATAGGGGAAAGCTGTACGAGTNNTGCA
GTAGTTCAAGCATGGTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTAT
GGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAG
CCAGCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGAT
CCCAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAG
CTTGAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATC
AACAAGAACTCAGTACATGCTGGACACCCTTACTGAACTGCAACATAAGT
TGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAGGGATAC
CAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTATGG
GCTTAAACCAGCTCAACCTCAGGGCGATAGCTTCTTTCACGCCTTGGAAT
GTGAACCCACATTGCAAATTGGATACCAGCCTGCGGACCCAATATCGGTT
GTCACAGCAGGCCCGAGTCTGAATAATTACATGCAAGGATGGCTACCATG
C
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